PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022926271.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | GRAS | ||||||||
Protein Properties | Length: 576aa MW: 64719 Da PI: 4.6133 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 432.2 | 3.9e-132 | 206 | 576 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 ++ L+ecA a+s++++e+a+a++++l+ ++s +gdp qR+aay++e+Laarl++s++ lykal+++e + ss++laa+++++ev+P++kf+++ XP_022926271.1 206 RQILMECASAISEDNFEEASAMIEQLRGMVSVQGDPSQRIAAYLVEGLAARLLESGKCLYKALRCKEPP---SSDRLAAMQILFEVCPCFKFGFM 297 689*****************************************************************9...9********************** PP GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189 +aN aI ea++ e+r+HiiDfd+sqG+Q++ L+q La++p++pp+lR+Tgv++pes+ l+++g+rL+++A++l+vpfef++ +a++ +d+ XP_022926271.1 298 AANCAIIEAAKDEKRIHIIDFDVSQGTQYIKLIQMLAAQPGKPPHLRLTGVDDPESVqrPVGGLRHIGQRLEQLAKALRVPFEFHA-IASNASDV 391 *******************************************************99888899***********************.7******* PP GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284 ++++L+ +pgEal+Vn+++ lh+++desvs+ + rd++L++vk+l+Pk+v+vveq+++ n+++F+ rf+e+ +yy+a+++sl+++lpr+s++ri+ XP_022926271.1 392 TPSMLASRPGEALIVNFAFLLHHMPDESVSTVNLRDRLLRMVKGLNPKLVTVVEQDMNANTTPFVSRFIETYNYYAAVYNSLDVTLPRDSQDRIN 486 *********************************************************************************************** PP GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 vEr++l+++ivn+vaceg+er+er e ++kWr+r+++aGF++ ++sek+++ ++ l+ + + + +++ ee g+l +gW++++L+++SaWr XP_022926271.1 487 VERQCLAKDIVNIVACEGEERVERYEVAGKWRARMTMAGFTSCSMSEKVTDPIRKLIMEEYCERFKMYEEMGTLHFGWEEKSLIVTSAWR 576 ***********************************************************99888*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 576 aa Download sequence |
MSLVGPSDPS PLSYGTRKLY SLKGTKNASD LSTQRFGSEK NRTMYMNDSY YSESYDKYFL 60 DFPIEELSVS GISTDSFHPN AALYGIRADS LSPLCDSFTC FDAYQSNSYS VCLESTSPEQ 120 LDFEDDQVRQ KLQELERDLL GEPDSADYED EMFANGQSME IDSEWANSIQ DALLHDSPKE 180 SSSTNSNFST ISSNKDASQI SSQNPRQILM ECASAISEDN FEEASAMIEQ LRGMVSVQGD 240 PSQRIAAYLV EGLAARLLES GKCLYKALRC KEPPSSDRLA AMQILFEVCP CFKFGFMAAN 300 CAIIEAAKDE KRIHIIDFDV SQGTQYIKLI QMLAAQPGKP PHLRLTGVDD PESVQRPVGG 360 LRHIGQRLEQ LAKALRVPFE FHAIASNASD VTPSMLASRP GEALIVNFAF LLHHMPDESV 420 STVNLRDRLL RMVKGLNPKL VTVVEQDMNA NTTPFVSRFI ETYNYYAAVY NSLDVTLPRD 480 SQDRINVERQ CLAKDIVNIV ACEGEERVER YEVAGKWRAR MTMAGFTSCS MSEKVTDPIR 540 KLIMEEYCER FKMYEEMGTL HFGWEEKSLI VTSAWR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21450.1 | 0.0 | GRAS family protein |