PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022925921.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 454aa MW: 49380.5 Da PI: 8.2786

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022925921.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	118	1.2e-36	86	235	2	134
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..................ssssaseceaess 78 g+kdrhsk+ T++g+RdRRvRls+ +a++f+dLqd+LGfd++sk+ieWL+++a ai el+++ + ++ + +++++ XP_022925921.1 86 SGGKDRHSKVWTSKGLRDRRVRLSVATAIQFYDLQDRLGFDQPSKAIEWLIKAAADAIAELPSLnasfpetpkqlsgekisvTDQPR-SLDPVEQ 179 689*************************************************************77666555544443332211111.1122222 PP TCP 79 sssasnsssg...kaaksaakskksqksaasalnlak....esrakarararertrekmrikn 134 ++ + + +++a+s++s++s+ s l+l++ r kar+ra+er ++++ +++ XP_022925921.1 180 NQ-------SqlhVSLSKSACSSNSETSKGSGLSLSRsevrVNRLKARERAKERAQKEKEKEQ 235 22.......123344444446666666666666666642336669999999996655554443 PP

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence
MEVVDNIQEQ PRKFPRLATG RSSDSNKIGL KGVENIQPED EEDKESKRVG GSTALVGSGG 60 VGGDDDDGNR LRGWHHSRII RVSQASGGKD RHSKVWTSKG LRDRRVRLSV ATAIQFYDLQ 120 DRLGFDQPSK AIEWLIKAAA DAIAELPSLN ASFPETPKQL SGEKISVTDQ PRSLDPVEQN 180 QSQLHVSLSK SACSSNSETS KGSGLSLSRS EVRVNRLKAR ERAKERAQKE KEKEQDSSRI 240 ADHNLTSMAP NSSFTQLLSG GAATVSAHRD AGVAVERQWQ SSTVAMDYFS SGILESSTSR 300 THHSSGFSEQ MNLGTPLPQT MSSTPLFSSV SASDNNAEQL HHFSFVHDGN IIPVATTQPA 360 GGSDYNLNFT IASNLPGYYR GTLQSNSSLL PHIQRFSPVD GSNLPFLFGA ATSSAAPQME 420 NHHHYQFSPA FDGRLQLCYG GGSRQSEQKG KEKK

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence

MEVVDNIQEQ PRKFPRLATG RSSDSNKIGL KGVENIQPED EEDKESKRVG GSTALVGSGG  60
VGGDDDDGNR LRGWHHSRII RVSQASGGKD RHSKVWTSKG LRDRRVRLSV ATAIQFYDLQ  120
DRLGFDQPSK AIEWLIKAAA DAIAELPSLN ASFPETPKQL SGEKISVTDQ PRSLDPVEQN  180
QSQLHVSLSK SACSSNSETS KGSGLSLSRS EVRVNRLKAR ERAKERAQKE KEKEQDSSRI  240
ADHNLTSMAP NSSFTQLLSG GAATVSAHRD AGVAVERQWQ SSTVAMDYFS SGILESSTSR  300
THHSSGFSEQ MNLGTPLPQT MSSTPLFSSV SASDNNAEQL HHFSFVHDGN IIPVATTQPA  360
GGSDYNLNFT IASNLPGYYR GTLQSNSSLL PHIQRFSPVD GSNLPFLFGA ATSSAAPQME  420
NHHHYQFSPA FDGRLQLCYG GGSRQSEQKG KEKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18390.1	2e-71	TCP family protein