PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022925838.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WOX

Protein Properties

Length: 355aa MW: 39140.7 Da PI: 7.6114

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022925838.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.3	2.4e-17	50	110	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F++ +p ++e++++ +l ++ +++V++WFqNr+ + k+ XP_022925838.1 50 KPRWNPKPEQIRILEAIFNSgMVNPPRDEIRKIRGQLqeygQVGDANVFYWFQNRKSRSKN 110 89***************99***********************************995 PP
2	Wus_type_Homeobox	110.4	1e-35	49	111	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe++++sG+++P+++ei++i+ +L+eyG+++d+NVfyWFQNrk+R+++k XP_022925838.1 49 PKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRGQLQEYGQVGDANVFYWFQNRKSRSKNK 111 579**********************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MASSNSHWPS MFKSRPCNSH HQWQHDINCL RSAPYNTVVG EYEEKSPDPK PRWNPKPEQI 60 RILEAIFNSG MVNPPRDEIR KIRGQLQEYG QVGDANVFYW FQNRKSRSKN KLRHLHNSKS 120 NHNSPTTTTT AAAAAAPTTT TKTTTLSPTA ATTCSSSSSS DKSSPKISPM KSFTSNSVSQ 180 SYLQQPTNEL LPESFFFPMP QTGDGGGVIS NLGQGFCFSE LCSVVQHVPD HGFESCTNLL 240 LSESEPFKKD LMKSQPQPQF MNYHPYLNIA TDQSLPQTTI STAIPQGVGE VYGVGGKSTV 300 FINGVAFEVG CGPFNVREAF GDDAVLIHST GQPVLTNDWG LTLHSLQHGA YYYLI

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MASSNSHWPS MFKSRPCNSH HQWQHDINCL RSAPYNTVVG EYEEKSPDPK PRWNPKPEQI  60
RILEAIFNSG MVNPPRDEIR KIRGQLQEYG QVGDANVFYW FQNRKSRSKN KLRHLHNSKS  120
NHNSPTTTTT AAAAAAPTTT TKTTTLSPTA ATTCSSSSSS DKSSPKISPM KSFTSNSVSQ  180
SYLQQPTNEL LPESFFFPMP QTGDGGGVIS NLGQGFCFSE LCSVVQHVPD HGFESCTNLL  240
LSESEPFKKD LMKSQPQPQF MNYHPYLNIA TDQSLPQTTI STAIPQGVGE VYGVGGKSTV  300
FINGVAFEVG CGPFNVREAF GDDAVLIHST GQPVLTNDWG LTLHSLQHGA YYYLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	2e-57	WOX family protein