PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022925801.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB_related | ||||||||
Protein Properties | Length: 438aa MW: 50528.7 Da PI: 8.9027 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.7 | 8.4e-11 | 316 | 363 | 4 | 48 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E +lvd+++++G+g+W++I r++ +Rt+ +++++w+++l XP_022925801.1 316 WTLTEVMRLVDGIAEYGTGRWTRIKRHLFassPHRTPIDLRDKWRNLL 363 ****************************99****************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 438 aa Download sequence |
MDQEVHFCQK FTNMNYHWVK MEGSFLPAPL NESNEVDHFL VEPKSDHELG NCLRVQDFSR 60 DFGYEIQTNG DAEVDENSFR QNRGLQLGKP SSESKSQGSS RSDTDAFEIS ELSATMVMEA 120 EFNNTPVERS LTRELFSGLR TRGGCATPFE GNICDTILDN NNIHKFNTNE NYLENEKISD 180 ENVKGDIVAS KLASCSRERR LRKPTRRYIE EFADSKSENN KGRRKPPTKD KYLKVTSTEE 240 SNHIRHKVQM LTPKDESHCG TSVPVQSRSQ RRHPEKHVPV SGFLSEDEPS ATECKNVYSS 300 AKICKKYDRR KHQKMWTLTE VMRLVDGIAE YGTGRWTRIK RHLFASSPHR TPIDLRDKWR 360 NLLKASCVNI QNSKGTECKQ PHASRPLPKS LLQRVYELAN IYPYPKERSP KPVREATPPM 420 YLIESNSLSF NWGRKKYE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 198 | 204 | ERRLRKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72650.2 | 3e-24 | MYB_related family protein |