PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022925566.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

E2F/DP

Protein Properties

Length: 465aa MW: 52194.3 Da PI: 4.9955

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022925566.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	81.1	9.6e-26	135	200	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++++gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn i wkg XP_022925566.1 135 RYDSSLGLLTKKFINLIKQARDGILDLNKAAETL---QV--QKRRIYDITNVLEGIGLIEKKLKNIIYWKG 200 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MRGGSRAPNR SEPLPHSQTA QILPPLKRQL AFESNKPLRA SSNSFDQEPD SIAVKPLKPK 60 QTGVMYTNVV ESNDCIQDQG FSKDSLSSVQ TPVSAKGGRM YNKSKTSRRM TSGTQTPISD 120 TTGIYSPLTP AGNCRYDSSL GLLTKKFINL IKQARDGILD LNKAAETLQV QKRRIYDITN 180 VLEGIGLIEK KLKNIIYWKG FNTQVPGNVD SDTSMLQVDV ENLSFEERRL NDKIRTLQER 240 LRNLSEDENL QKWLFVTEED IKSLPCFQNE TLIAIKAPHG TTLEVPDPDE AVDYPQRRYR 300 IVLRSTMGPI DVYLVSQFEE KFEEVNVVKP PRNFLHASSS GSNEHLATEA IRESSRDEIE 360 PQAHLSQYSS SCDVNGSNEF PGGMMKIIPS EFDNDADYWL LSDAEVSITD MWRTDSDIAW 420 DESHMVSQDF LISDVSAQRP RPGSPHSETV EAPSDVNSRQ SQTNS

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MRGGSRAPNR SEPLPHSQTA QILPPLKRQL AFESNKPLRA SSNSFDQEPD SIAVKPLKPK  60
QTGVMYTNVV ESNDCIQDQG FSKDSLSSVQ TPVSAKGGRM YNKSKTSRRM TSGTQTPISD  120
TTGIYSPLTP AGNCRYDSSL GLLTKKFINL IKQARDGILD LNKAAETLQV QKRRIYDITN  180
VLEGIGLIEK KLKNIIYWKG FNTQVPGNVD SDTSMLQVDV ENLSFEERRL NDKIRTLQER  240
LRNLSEDENL QKWLFVTEED IKSLPCFQNE TLIAIKAPHG TTLEVPDPDE AVDYPQRRYR  300
IVLRSTMGPI DVYLVSQFEE KFEEVNVVKP PRNFLHASSS GSNEHLATEA IRESSRDEIE  360
PQAHLSQYSS SCDVNGSNEF PGGMMKIIPS EFDNDADYWL LSDAEVSITD MWRTDSDIAW  420
DESHMVSQDF LISDVSAQRP RPGSPHSETV EAPSDVNSRQ SQTNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-141	E2F/DP family protein