PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022925494.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MIKC_MADS
Protein Properties Length: 206aa    MW: 23517.3 Da    PI: 6.894
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022925494.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF79.81.9e-25958150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krien   rqvtf+kRr+g+lKKA+ELSvLCdae+ v ifs +gklye +
  XP_022925494.1  9 KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELA 58
                    79*********************************************965 PP
2K-box51.93.2e-188517511100
           K-box  11 eakaeslqqelakLkkeienLqreqRhllGedLesL.slkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                     ++++ + ++e+++Lk+eie L+     l G ++e + +l eL  Le+qLe  + ++Rs+K+++++e+i+ l+++e  l+ +nk+L+ k+ee
  XP_022925494.1  85 DNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGIrTLDELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDKMEE 175
                     56777899**************985566678899984589************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MARGKVQLKR IENPVHRQVT FCKRRAGLLK KAKELSVLCD AEIGVFIFSA HGKLYELATK  60
GTMQGLIERY MNHTNGSQPP EPPIDNQTLE VKEEVNRLKQ EIEVLKGLRN ALGGGGVEGI  120
RTLDELDMLE KQLEIWICQV RSTKMKFMCE EIDALRNQEL ILKAANKYLH DKMEENICNT  180
TNIEAVNITN CQYPLTIQDE LFQLCT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71692.13e-70MIKC_MADS family protein