PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022925447.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 160aa MW: 17682.1 Da PI: 6.5094 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.4 | 6.4e-17 | 5 | 54 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr +k +g+Wv+eIr p gk++r++lg++ +++Aa+a++ a++ l+g XP_022925447.1 5 TYTGVRKRK-WGKWVSEIRQP---GKKTRIWLGSYHLPQMAAAAYDVAALHLRG 54 69****999.**********8...557*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 160 aa Download sequence |
MAEPTYTGVR KRKWGKWVSE IRQPGKKTRI WLGSYHLPQM AAAAYDVAAL HLRGPNARLN 60 FPDLIDSFPR PATSSPDDIQ AAAHMAALRL ANTKPPPAAQ HPPAPVRIGL SPSQIQAINE 120 SPLDSPTMWM QMAAEALCLE DYLCDGFDVE DNSIWDYSSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G33760.1 | 2e-40 | ERF family protein |