PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022925247.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 379aa    MW: 40782 Da    PI: 8.6498
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022925247.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH38.71.7e-12327126
                    --S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHg 26
                    yk e+Cr+f+r G C+yG+rCkF H+
  XP_022925247.1  3 YKKEPCRNFQR-GSCQYGERCKFLHV 27
                    9**********.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    
MHYKKEPCRN FQRGSCQYGE RCKFLHVTQQ PQKPSNFGSG MQTSSQQQQK PNPFGFGVHS  60
TGQSKAAVDS GSKQNQYKLY DNKWTRSSTP TGNAPSRKPD NQPASANHIC TDGESCKRQI  120
AEDFQNERPL WKLTCYGHSK SQPCDIVGDV SYEELRAIAY DEAKRGISLQ SIVERERNLL  180
NSKLAEFESL LHKPYVTPSN RASGNQSSLI VTNSLSIQPS SQNSGPPSLS SFSQLGASLN  240
TGFGARPSNP PNNAFGQPVQ FSSSPENSSA FGATNFPSTN AGAVGGVFGS QVPSQTFGNS  300
TLSGFNNSGI TNAGSNLLSS PAIPTKFPST DAGGQILSNA QLVNKLQQEN SSVDVSIWLK  360
EKWVPGEIPE VAPPDAVVQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75340.21e-75C3H family protein