PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022925045.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 354aa MW: 39045.6 Da PI: 6.5524

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022925045.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.1e-05	190	209	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ XP_022925045.1 190 FSCPVCFKTFNRYNNMQMHM 209 89*****************9 PP
2	zf-C2H2	15.5	4.9e-05	274	296	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +Cgk F + + ++H +++ XP_022925045.1 274 FTCRKCGKAFAVRGDWRTHEKNC 296 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MCVYVYGSFS LLQNFNLPFS LSSIPISMAD PYSNSLASLL KFSSLHHHFP QSQPSPSPSH 60 LNMSLNCLPY PYLGSGSGSG SGSGSGSPPP SSPPLREALP LLGLISPPEQ RQEQEEEDDG 120 GDDEGNDESV TVALHIGLPS PSTVEMGSSE IDHSNNNDNL DDFGQSTKTL IKGQYWIPTP 180 TQILIGPTQF SCPVCFKTFN RYNNMQMHMW GHGSQYRKGP ESLRGTQPTG MLRLPCYCCA 240 PGCRNNIDHP RAKPLKDFRT LQTHYKRKHG LKPFTCRKCG KAFAVRGDWR THEKNCGKLW 300 YCICGSDFKH KRSLKDHVKA FGNDHAAYGV GGVDGFGDEE EDDPASEVEQ DNNE

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MCVYVYGSFS LLQNFNLPFS LSSIPISMAD PYSNSLASLL KFSSLHHHFP QSQPSPSPSH  60
LNMSLNCLPY PYLGSGSGSG SGSGSGSPPP SSPPLREALP LLGLISPPEQ RQEQEEEDDG  120
GDDEGNDESV TVALHIGLPS PSTVEMGSSE IDHSNNNDNL DDFGQSTKTL IKGQYWIPTP  180
TQILIGPTQF SCPVCFKTFN RYNNMQMHMW GHGSQYRKGP ESLRGTQPTG MLRLPCYCCA  240
PGCRNNIDHP RAKPLKDFRT LQTHYKRKHG LKPFTCRKCG KAFAVRGDWR THEKNCGKLW  300
YCICGSDFKH KRSLKDHVKA FGNDHAAYGV GGVDGFGDEE EDDPASEVEQ DNNE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-124	C2H2 family protein