PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022924624.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | ERF | ||||||||
Protein Properties | Length: 221aa MW: 24402.2 Da PI: 5.046 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.9 | 5e-18 | 79 | 130 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+++AeIrd + + r++lg+f++ae Aa a+++a+ +++g+ XP_022924624.1 79 PYRGVRRRP-WGKFAAEIRDSTR---HgIRVWLGTFDSAEAAALAYDQAAFSMRGA 130 59*******.**********422...25*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MDYAGFFSSV SDFSSEASFG SPESCNFLPF NENDSEEMLL FGLISAGTRE SSDPSIGAVR 60 VKEEEVDSVG EDTRKKERPY RGVRRRPWGK FAAEIRDSTR HGIRVWLGTF DSAEAAALAY 120 DQAAFSMRGA AAILNFPVDR VRESLKEMNF GGGEAADSIT DDGGSPVIAL KRKHSIRRKA 180 ISKKNKQRDL RIQNVMVLED LGAEYLEELL GSSQNSIPCS F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 6e-65 | ERF family protein |