PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022924618.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C2H2 | ||||||||
Protein Properties | Length: 368aa MW: 41790.9 Da PI: 5.7961 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.7 | 0.00078 | 4 | 26 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C +sFs+ L H+r+H XP_022924618.1 4 HKCKLCFRSFSNGRALGGHMRSH 26 79********************9 PP | |||||||
2 | zf-C2H2 | 13.6 | 0.0002 | 237 | 259 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k+F++ L H +H XP_022924618.1 237 YKCETCNKVFRSYQALGGHRASH 259 9***********99999998887 PP | |||||||
3 | zf-C2H2 | 11.4 | 0.001 | 289 | 311 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C ++Fs+ L H r+H XP_022924618.1 289 HECPVCFRVFSSGQALGGHKRSH 311 79******************999 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 368 aa Download sequence |
MDRHKCKLCF RSFSNGRALG GHMRSHLMNL PLPPKPEDPP PPHAHLSEDA DSASFLSSPS 60 SSEGDAEEKG LGYGLRENPK RSIRVVDPEF SFAVDAGSVV LQDRESETES SKNPTRRRSK 120 RTRKLDHHHH QHVHEHHHYS AFKRLQEKKV NQPESWTEAE QVSSISGSTT EQDVAFWLMM 180 LSRDKWTKQR GGYEEEEEEE EEEDNEDEED EEVEESMEET DDSEALKFPK NRNRGNYKCE 240 TCNKVFRSYQ ALGGHRASHK KIKLSVTYNN PQLVTQRENA ASMGERKIHE CPVCFRVFSS 300 GQALGGHKRS HVTAYSSPNS IPPKTPPPKE LGDSFIDLNL PAPFEEDDVS QIELSAVSDA 360 DFVNAIRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60580.1 | 6e-60 | C2H2 family protein |