PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022924526.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB_related | ||||||||
Protein Properties | Length: 316aa MW: 35203 Da PI: 10.1482 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.5 | 1.5e-13 | 55 | 99 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT++E++++++a +++ + Wk+I + +g +t q++s+ qky XP_022924526.1 55 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 99 789*****************77.*********.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence |
MSMSYFPGID SVRPPTASLR TPAPPTSTSN CVASFPVSED ASKKIRKPYT ITKSRESWTE 60 QEHDKFLEAL QLFDRDWKKI EAFVGSKTVI QIRSHAQKYF LKIQKSGKSE HVPPPRPKKK 120 ASHPYPQKAP KNATTQSPGM YPPLSTPFEP RYTYIPDSTA GFGLPSPHAS WSCSPVPTID 180 FSQVPKDRVK LAGPTSHSSS SGSTSRTRKI GEISDQGDQS MRNIVMPDFA QVYSFIGSVF 240 DPSVSGHLQR LRKMDPINLE TALLLMQNLA INLISPEFEN HRRLISSYDE GMKQAKAGSL 300 YNSLYNVRSH NTILSA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52660.2 | 1e-101 | MYB_related family protein |