PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022924525.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 330aa    MW: 36811.8 Da    PI: 10.2649
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022924525.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.82.9e-095591139
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkq 39
                     r +WT++E++++++a +++  + Wk+I + +g  +t  q
   XP_022924525.1 55 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQ 91
                     789*****************77.*********.999766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MSMSYFPGID SVRPPTASLR TPAPPTSTSN CVASFPVSED ASKKIRKPYT ITKSRESWTE  60
QEHDKFLEAL QLFDRDWKKI EAFVGSKTVI QLFFFGGSRK NVQNLIRSHA QKYFLKIQKS  120
GKSEHVPPPR PKKKASHPYP QKAPKNATTQ SPGMYPPLST PFEPRYTYIP DSTAGFGLPS  180
PHASWSCSPV PTIDFSQVPK DRVKLAGPTS HSSSSGSTSR TRKIGEISDQ GDQSMRNIVM  240
PDFAQVYSFI GSVFDPSVSG HLQRLRKMDP INLETALLLM QNLAINLISP EFENHRRLIS  300
SYDEGMKQAK AGSLYNSLYN VRSHNTILSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.22e-97MYB_related family protein