PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022924300.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 305aa MW: 32991.5 Da PI: 7.4625

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022924300.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	108.6	3.4e-34	40	94	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGGs+kAtPkti+++m+vkgLtl+h+kSHLQkYRl XP_022924300.1 40 KPRLRWTAELHERFVDAVTQLGGSDKATPKTIMRTMGVKGLTLYHLKSHLQKYRL 94 79****************************************************8 PP
2	Myb_DNA-binding	75.4	8e-24	42	93	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e++vdav+qlGg t+ktI+rtmg kg+tl+++ks++qky+ XP_022924300.1 42 RLRWTAELHERFVDAVTQLGGSdkaTPKTIMRTMGvKGLTLYHLKSHLQKYR 93 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MYSVIPALPM DGGGGGKFQG SLDGTNLPGD ACLVLTSDPK PRLRWTAELH ERFVDAVTQL 60 GGSDKATPKT IMRTMGVKGL TLYHLKSHLQ KYRLGKQSFK ESTENSKDAS CIAESQETSS 120 SSSPSSKIIA RDLNDSFQVT EALRAQMEVQ RRLHEQLEVQ RRLQLRIEAQ GKYLQSILER 180 ACRALSDQAA ASAGLEAARE ELSELAMKVA NESKDIAPLE TQKVLPFSEL AAALENPKAP 240 TVMPRVGDCS MDSCLTSAGS PVSPIGVGST TTGMKRPRPV FSHGDSMALE GNARRDVEWM 300 VSNVG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	275	279	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24120.1	1e-112	G2-like family protein