PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022924161.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

FAR1

Protein Properties

Length: 776aa MW: 89736.9 Da PI: 8.21

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022924161.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	78.1	1.7e-24	76	183	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..................tekerrtraetrtgCkaklkvkkekdgkwev 78 fY+eYAk+ GF v +++s++s+ +g++++++f C+k+g ++e+ +++ r++r+ ++t+Cka+++vk+ ++gkw + XP_022924161.1 76 FYKEYAKSFGFCVIIKASRRSRISGKFIDAKFACTKYGDKRESGVVdvsdpvtnsnngigvhgkKKRGRTNRSWEKTDCKACMHVKRLQSGKWAI 170 *************************************9999887899*********99899999********************* PP FAR1 79 tkleleHnHelap 91 +++ +eHnHe++p XP_022924161.1 171 HSFIKEHNHEVFP 183 ********875 PP

Sequence ? help Back to Top
Protein Sequence Length: 776 aa Download sequence
MDDNSVHCGK EMCTRDGTDS SSHMVGKENT GPTVNMDMPK YRNIEYSQNV LNLKSFRIVE 60 PREGMEFESK ENAFTFYKEY AKSFGFCVII KASRRSRISG KFIDAKFACT KYGDKRESGV 120 VDVSDPVTNS NNGIGVHGKK KRGRTNRSWE KTDCKACMHV KRLQSGKWAI HSFIKEHNHE 180 VFPDESYYFR GHGNLEVGSS NTDVLHSNRA RRKSKLCMKS KLSGGCTIAK KQNVVAIDQV 240 CKARRLAIDE GDVQVMLDHF VCMQDENPNF FYSIDLNEKQ CLRNLFWVDA KGRLDYANFA 300 DVVFFDTTYI KNEYRLSFAP FIGVNHHCQF VLLGCSLVAD ETKSTYAWLM RAWLRSMHKC 360 PPKVILTIQD EALKEAIAEE LPNSFHCYCL WDIYSKIPEK LSHVMRQREN FISMFDECIF 420 KSWTIEEFEK RWLRIVDRFE LSHDSWFKLL YADRNRWIPA CLKNIFLAGM YTRHRPEGIN 480 SFLDKYIQRK TSLREFLDHY RTFARDKFEE EGKADLETLH KQPGLKSPSP FGKQMAGLYT 540 HAVFKKFQVE VLGVVACHPR KISEDGVIKV FRVQDFENNQ DFLVEWNEAT SDISCLCRSF 600 EFNGYLCRHV MIVLQISGIH CIPSQYVLTR WTRDAKSRQQ TRKGSHVESR VQRYINLCQQ 660 AFRLSNEGSL SHESYNVAFD ALEEALRKCE SLNVSIQPSL VAHSSSSHES EEVNQGKNAN 720 KDNKKNTTNV SRQDCFEPEI NTVRIHDGWQ QLAPALHYPD EQGDSQGVVR LTLDAL

Sequence ? help Back to Top

Protein Sequence Length: 776 aa Download sequence

MDDNSVHCGK EMCTRDGTDS SSHMVGKENT GPTVNMDMPK YRNIEYSQNV LNLKSFRIVE  60
PREGMEFESK ENAFTFYKEY AKSFGFCVII KASRRSRISG KFIDAKFACT KYGDKRESGV  120
VDVSDPVTNS NNGIGVHGKK KRGRTNRSWE KTDCKACMHV KRLQSGKWAI HSFIKEHNHE  180
VFPDESYYFR GHGNLEVGSS NTDVLHSNRA RRKSKLCMKS KLSGGCTIAK KQNVVAIDQV  240
CKARRLAIDE GDVQVMLDHF VCMQDENPNF FYSIDLNEKQ CLRNLFWVDA KGRLDYANFA  300
DVVFFDTTYI KNEYRLSFAP FIGVNHHCQF VLLGCSLVAD ETKSTYAWLM RAWLRSMHKC  360
PPKVILTIQD EALKEAIAEE LPNSFHCYCL WDIYSKIPEK LSHVMRQREN FISMFDECIF  420
KSWTIEEFEK RWLRIVDRFE LSHDSWFKLL YADRNRWIPA CLKNIFLAGM YTRHRPEGIN  480
SFLDKYIQRK TSLREFLDHY RTFARDKFEE EGKADLETLH KQPGLKSPSP FGKQMAGLYT  540
HAVFKKFQVE VLGVVACHPR KISEDGVIKV FRVQDFENNQ DFLVEWNEAT SDISCLCRSF  600
EFNGYLCRHV MIVLQISGIH CIPSQYVLTR WTRDAKSRQQ TRKGSHVESR VQRYINLCQQ  660
AFRLSNEGSL SHESYNVAFD ALEEALRKCE SLNVSIQPSL VAHSSSSHES EEVNQGKNAN  720
KDNKKNTTNV SRQDCFEPEI NTVRIHDGWQ QLAPALHYPD EQGDSQGVVR LTLDAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	0.0	FAR1 family protein