PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022924097.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

E2F/DP

Protein Properties

Length: 381aa MW: 42526.5 Da PI: 8.9443

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022924097.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	73.1	2.9e-23	23	88	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++fl+l+++ + l+++a++L v +rRRiYDi+NVLe+++++++k+kn+++w+g XP_022924097.1 23 RKQKSLGLLCSNFLSLYNHDGVHSIGLDDAASRL---GV--ERRRIYDIVNVLESVGVLSRKAKNQYSWNG 88 79***************999********.....****************************98 PP
2	E2F_TDP	76.6	2.4e-24	155	235	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 r+eksL lltq+f+kl+ +s+ +++l+e+ak L+ + +++k+RR+YDi+NVL+++nliek ++k+++rw g XP_022924097.1 155 RREKSLALLTQNFVKLFICSHVSMISLDEAAKLLLGDghnssIMRTKVRRLYDIANVLSSMNLIEKthtadTRKPAFRWLG 235 689************************************999**********************99*****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MAALPSSSAL PDSCSSRHHT YSRKQKSLGL LCSNFLSLYN HDGVHSIGLD DAASRLGVER 60 RRIYDIVNVL ESVGVLSRKA KNQYSWNGFG AIPKALQDLK EEGLKENCSA SDGNDYAKVS 120 DDEDDDERFS NPTGSQNSTA AVPKSSSSSL KADNRREKSL ALLTQNFVKL FICSHVSMIS 180 LDEAAKLLLG DGHNSSIMRT KVRRLYDIAN VLSSMNLIEK THTADTRKPA FRWLGVRGKV 240 KNEPTVLPES RKRAFGTDVT NVSYKKTKAE SSAYQGLNHC LNVQKLVQCE NSSQEDSQNS 300 QDQECERTSK SYQFGPFSPI TVAKVSVSDN NNVKRSHDWE SLSSTFRPQY HNQALKELFS 360 HYVEAWKSWY SEAVKKPIQI S

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MAALPSSSAL PDSCSSRHHT YSRKQKSLGL LCSNFLSLYN HDGVHSIGLD DAASRLGVER  60
RRIYDIVNVL ESVGVLSRKA KNQYSWNGFG AIPKALQDLK EEGLKENCSA SDGNDYAKVS  120
DDEDDDERFS NPTGSQNSTA AVPKSSSSSL KADNRREKSL ALLTQNFVKL FICSHVSMIS  180
LDEAAKLLLG DGHNSSIMRT KVRRLYDIAN VLSSMNLIEK THTADTRKPA FRWLGVRGKV  240
KNEPTVLPES RKRAFGTDVT NVSYKKTKAE SSAYQGLNHC LNVQKLVQCE NSSQEDSQNS  300
QDQECERTSK SYQFGPFSPI TVAKVSVSDN NNVKRSHDWE SLSSTFRPQY HNQALKELFS  360
HYVEAWKSWY SEAVKKPIQI S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-128	E2F/DP family protein