PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022923711.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 599aa MW: 64492.2 Da PI: 7.7674

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022923711.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.7	6.5e-30	258	317	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt + +Cpv+k+v+r+a+d +++++tYeg+Hnh+ XP_022923711.1 258 MNDGCQWRKYGQKIAKGNPCPRAYYRCTGSpTCPVRKQVQRCADDMSILITTYEGNHNHP 317 58************************888**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 599 aa Download sequence
MEAAAAPAFG RPRPVVKPEK PAGDSDDDRN SPSNQSLLIK KENHGKEEHE SEDKTSNSSD 60 QKDLSCTKIQ EEQLESARTE MGEVREENQR LKMSLGQIMK DYEALKMQFL GIVGREAKKL 120 PEHDKEQRQR PHDDQTEETD LVSLTLGRYP MAEKKKAAEE KNINGGDKEE AVKQALSLGL 180 NCKFEQESTP ATVKEAHSPN RSLTISADHE TKEDAGETNW PPSKGLKTMR SADDDALPPN 240 PPKRARVCVR ARCETTTMND GCQWRKYGQK IAKGNPCPRA YYRCTGSPTC PVRKQVQRCA 300 DDMSILITTY EGNHNHPLPA SATAMASTTS AAASMLLSGS STSSAPNTTA AASSSSSSSN 360 HALSFYSNSK QNFYLPNNSS IISSTSPTHP TITLDLTSNP SSTSNPSTHF GKFPSSFPNS 420 RYPFTSQLDF GSSRNNVLSW NNGVLSYNRN SHPATTPTNN IYQNYIQHQR NTAMSLPHQQ 480 PPLPDTIAAA TKAITADPSF QSALAAALTS IIGSGGAGTG TVKSSARSEQ PLFQLTSTAT 540 TTTNKGNGCG TSFLSNITTA TPSNSPPTGN MAFVPASSLP FSNPKSASAS PGDHIDLTN

Sequence ? help Back to Top

Protein Sequence Length: 599 aa Download sequence

MEAAAAPAFG RPRPVVKPEK PAGDSDDDRN SPSNQSLLIK KENHGKEEHE SEDKTSNSSD  60
QKDLSCTKIQ EEQLESARTE MGEVREENQR LKMSLGQIMK DYEALKMQFL GIVGREAKKL  120
PEHDKEQRQR PHDDQTEETD LVSLTLGRYP MAEKKKAAEE KNINGGDKEE AVKQALSLGL  180
NCKFEQESTP ATVKEAHSPN RSLTISADHE TKEDAGETNW PPSKGLKTMR SADDDALPPN  240
PPKRARVCVR ARCETTTMND GCQWRKYGQK IAKGNPCPRA YYRCTGSPTC PVRKQVQRCA  300
DDMSILITTY EGNHNHPLPA SATAMASTTS AAASMLLSGS STSSAPNTTA AASSSSSSSN  360
HALSFYSNSK QNFYLPNNSS IISSTSPTHP TITLDLTSNP SSTSNPSTHF GKFPSSFPNS  420
RYPFTSQLDF GSSRNNVLSW NNGVLSYNRN SHPATTPTNN IYQNYIQHQR NTAMSLPHQQ  480
PPLPDTIAAA TKAITADPSF QSALAAALTS IIGSGGAGTG TVKSSARSEQ PLFQLTSTAT  540
TTTNKGNGCG TSFLSNITTA TPSNSPPTGN MAFVPASSLP FSNPKSASAS PGDHIDLTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	4e-59	WRKY family protein