PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022923503.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 231aa MW: 24360.6 Da PI: 5.3506

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022923503.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.8	2e-06	128	149	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC C+k+F+++ L H+r+H XP_022923503.1 128 KCATCNKVFKSWKALFGHLRSH 149 7********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MEKNTNANAN PNINVDADIN TIPESTSPDQ RHGRETSPMA VSPPPASIDD NNPTPPVINL 60 SSVAPAPERA TTGDVGTSSS STHGHVGGGS NTEVGKKRGR GDGGEQQQQV KAAKKKGELT 120 EVPKGDPKCA TCNKVFKSWK ALFGHLRSHP ERTYRGALPP PTAAELDIRH CQQQFASTLL 180 TVAQGVAASR RGLDIDLNQP SAAEESESPE KSGGVGFDLN VEQPPESDND E

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	95	101	GKKRGRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35700.1	2e-14	C2H2 family protein