PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022923417.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ARR-B
Protein Properties Length: 559aa    MW: 62141.1 Da    PI: 5.357
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022923417.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like88.27.6e-28315368256
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                      +++WtpeLH++Fv+aveqL G ++A+P++ilelmkv+gLt+++v+SHLQkYR++
  XP_022923417.1 315 LKVDWTPELHRKFVQAVEQL-GVNQAIPSRILELMKVEGLTRHNVASHLQKYRMH 368
                     5899****************.9*******************************96 PP
2Myb_DNA-binding43.66.8e-14317366248
                      SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                        WT+e++ ++v+av+qlG +   +++I + m  +g+t+ ++ s++qky+
   XP_022923417.1 317 VDWTPELHRKFVQAVEQLGVNqaIPSRILELMKvEGLTRHNVASHLQKYR 366
                      57***********************************************7 PP
3Response_reg23.82.2e-09201261109
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vl+ d + +    +r+ le+ +y +v +  +  +al  +  k   +++ ++ +  +  dG   +k +++++ +lp i+++     +++ +++ +G
  XP_022923417.1  20 VLLLDGDSSSSAEIRTKLEEMEY-VVVTYYNENDALSAISSKPntFHVAIVEVTTSSHDGN--FKFLEAAK-DLPTIMISNIHCLSTMMKCIALG 110
                     68888889999999*********.***************666666**************95..56666655.9*******9999*********** PP

                     ESEEEESS--HHHHHH CS
    Response_reg  94 akdflsKpfdpeelvk 109
                     a +fl Kp ++++l++
  XP_022923417.1 111 AIEFLQKPLSEDKLRN 126
                     *************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 559 aa     Download sequence    
MVCTASDLQG WKDFPKDLRV LLLDGDSSSS AEIRTKLEEM EYVVVTYYNE NDALSAISSK  60
PNTFHVAIVE VTTSSHDGNF KFLEAAKDLP TIMISNIHCL STMMKCIALG AIEFLQKPLS  120
EDKLRNIWQH VVHKAFNAGG SAVPSSLKPI KESVASILHL ESENSENNNP VPKELEISSG  180
DDDNDRELLE GSDKYPAPST PQQKHGMRLV DDGDCQDQLN CLLEKECVEQ DGESKSVETT  240
CINSLGEGTS QVENTQLPDK EGIKEEENSA DGCGAASNDD HEIHDQDIIS SSEENKSKAC  300
GLGNSSGTKV SRKKLKVDWT PELHRKFVQA VEQLGVNQAI PSRILELMKV EGLTRHNVAS  360
HLQKYRMHKR HILPKQDDSS WSHSKDPMRK NCYPQRPVMA FPPPYHSNHV MPVAPIYPPW  420
GHMACPSPSV QMWVSPGYPS WQPQEIWPWK SYPGMYADAW GCPVTPPPHS PLPSHLPQPI  480
FRFENADAHD KSYGIAFNPI ELQLADEEID KVVREAISKP WLPLPLGLKP PSTESVLSEL  540
SRQGISTVPS QINGSKLLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18020.31e-141ARR-B family protein