PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022922957.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 363aa MW: 39201.4 Da PI: 10.4477

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022922957.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.4	1.8e-14	122	167	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++WT+eE+ ++ + k+lG+g+W+ I++ + ++Rt+ q+ s+ qky XP_022922957.1 122 KPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKY 167 58*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MVRESPRKCS HCGLNGHNSR TCSNFLKGNN NYSNSSYYCV KLFGVNLMEN RDESMRKSLS 60 MGNLNLHSCN NVLDLNTAAA AAAAVNNVAD DNSASADNAG YLSDGFIHNK RRKAAHERKK 120 GKPWTEEEHR TFLAGLKKLG KGDWRGISKN FVTTRTPTQV ASHAQKYFLR KMHANEKKKR 180 RASLFDMPEI KNNVPQDCQA SGETSLPKNN SSENQQQVNN LPAQLINRFP HLCLDAPQFV 240 PPATGSAASA AANLHGIPYV VGVSPNVPIL PLVNIGRRGG GGVMAMPKSP RSPNAPMAGH 300 PSGIPPSPRT SPSRPILQQL QPSAIAVAAS NFEADALELK IGLPQSPQTQ NLSSQTSGAI 360 RVI

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MVRESPRKCS HCGLNGHNSR TCSNFLKGNN NYSNSSYYCV KLFGVNLMEN RDESMRKSLS  60
MGNLNLHSCN NVLDLNTAAA AAAAVNNVAD DNSASADNAG YLSDGFIHNK RRKAAHERKK  120
GKPWTEEEHR TFLAGLKKLG KGDWRGISKN FVTTRTPTQV ASHAQKYFLR KMHANEKKKR  180
RASLFDMPEI KNNVPQDCQA SGETSLPKNN SSENQQQVNN LPAQLINRFP HLCLDAPQFV  240
PPATGSAASA AANLHGIPYV VGVSPNVPIL PLVNIGRRGG GGVMAMPKSP RSPNAPMAGH  300
PSGIPPSPRT SPSRPILQQL QPSAIAVAAS NFEADALELK IGLPQSPQTQ NLSSQTSGAI  360
RVI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	177	181	KKKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61620.1	9e-55	MYB_related family protein