PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022922479.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 745aa    MW: 82466.6 Da    PI: 6.0809
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022922479.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.29.1e-2156110256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +k +++t++q++eLe +F+++++p+ ++r eL+++l L+++qVk+WFqNrR+++k
  XP_022922479.1  56 KKYHRHTPHQIQELEIFFKECPHPDDKQRSELSRRLCLETKQVKFWFQNRRTQMK 110
                     68899***********************************************999 PP
2START176.41.7e-552624832206
                     HHHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     +a++a++elv +a+ ++p+W +s+     e +n de+ ++f++s +      ++ea r+s++v+ ++  lve+l+d + +W e+++    +a+t+
  XP_022922479.1 262 FALAAMNELVEMAQTDAPLWIRSRdggsrETLNLDEYSRTFPSSAGmkhinWTTEATRDSTMVIINSLALVETLMDAN-RWAEMFPcliaRATTI 355
                     5789*************************************99998**9999**************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     +vi+sg      galqlm ael +lsplvp R   f+R++rq+ +g w++vdvS+ + ++ ++   +  +++lpSg+++e+++ng skvtwveh+
  XP_022922479.1 356 DVITSGmcgtrnGALQLMHAELRVLSPLVPvRTLKFLRFCRQHADGLWAVVDVSIGEGSDSNT---FLGCRRLPSGCVVEDMPNGFSKVTWVEHT 447
                     ************************************************************875...99999************************ PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++ ++h+l+r+l++sg+ +g ++w+a lqrqce+
  XP_022922479.1 448 EYDETVIHQLYRQLISSGIGFGSQRWLANLQRQCEC 483
                     **********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 745 aa     Download sequence    
MDGYGEVCLL GDGFDPSGAV RMREDEYDSR SGSDNIDGAL SGDDRDANDE QQPKGKKYHR  60
HTPHQIQELE IFFKECPHPD DKQRSELSRR LCLETKQVKF WFQNRRTQMK TQIERHENAI  120
LKQENDKLRA ENSVMKDAIA NPTCNTCGGP SIPGHLSFEE HHLRIENARL REELHRLYTV  180
TNKFLGWPVS SPFGNQGSSP SSDSCLELSV GRSGIGRSST VSDSMGLGNG HFGAGPVMPI  240
SKPEMGVSGN DIPLDRTIYV DFALAAMNEL VEMAQTDAPL WIRSRDGGSR ETLNLDEYSR  300
TFPSSAGMKH INWTTEATRD STMVIINSLA LVETLMDANR WAEMFPCLIA RATTIDVITS  360
GMCGTRNGAL QLMHAELRVL SPLVPVRTLK FLRFCRQHAD GLWAVVDVSI GEGSDSNTFL  420
GCRRLPSGCV VEDMPNGFSK VTWVEHTEYD ETVIHQLYRQ LISSGIGFGS QRWLANLQRQ  480
CECLAILMSS TIPTEDPAGI SPGGRRSMLK LSQRMVDKFC SGLCSSSLHK WDKLVVGNIS  540
EDVKVMARKS INEPGEPPGI VLSAATSVWM PVTQQRLFAF LQDDRLRSEW DILSNSRPML  600
EMVRISKGQD ADNRVSLLRA NPMNANESTM FILQETWTDI SGSLVVYAPV DTASVSLMMR  660
GGDSAYVSLL PSGFAILPNA TNNDKDASMK SGMNSGHDNG CLLTVAFQIL VNNLPTAKLT  720
VESVETVNNL IFCTIRKIKT ALQVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein