PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022922370.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 229aa MW: 25530.6 Da PI: 4.4575 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.9 | 1.1e-17 | 66 | 116 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ + +Wv+e r+p +k++r++lg++ tae+Aa+a++ a+++l+g XP_022922370.1 66 PVYRGVRRRN-NDKWVCEMREP---NKKTRIWLGTYPTAEMAARAHDVAALALRG 116 68*****887.8******9998...347*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 229 aa Download sequence |
MDLFSQFSDP LPYYGNCNYN SESSSAFFDA GTHPLTVATS DEEVILASNQ PKRPAGRRVF 60 KETRHPVYRG VRRRNNDKWV CEMREPNKKT RIWLGTYPTA EMAARAHDVA ALALRGKSAC 120 LNFADSAWRF PIPASDDPSV IRAAAAMAAN ECKDEECNAC REEDDVVLCQ PTASPDQPVY 180 VDDEALSNMP MLLANMAEGL LLSPPSFCVN DDVEWDDVAM SHDVSLWNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G25470.1 | 3e-58 | ERF family protein |