PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022922315.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HSF

Protein Properties

Length: 351aa MW: 39145.2 Da PI: 4.3504

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022922315.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.2	3.5e-35	25	115	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d++++++isw+++g++f+v+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+kv ++ weF+++ F++g+k ll++ XP_022922315.1 25 FLTKTYQLVDDSAVDDFISWNDDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFANDCFRRGEKGLLRD 110 9***************************************************************99.........************** PP XXXXX CS HSF_DNA-bind 97 ikrkk 101 i+r+k XP_022922315.1 111 IQRRK 115 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MAPSTAEPIV DSGSGDSQRS IPTPFLTKTY QLVDDSAVDD FISWNDDGST FIVWRPAEFA 60 RDLLPKYFKH NNFSSFVRQL NTYGFRKVVP DRWEFANDCF RRGEKGLLRD IQRRKVALSS 120 ATTTTTTAVS GPVLVAASPS VVAHVISPSN SGEEQVTSSN SSPMAFQRGT SCTTSPELMG 180 ENERLRKENM QLSHELTQLK GLCNNILSMM TNYASGHHHQ LESVSVRDMK ALELLPARQA 240 MKDDGPVSDG VQEVRLKVEE TTTASPAKRT APKLFGVSIG VKRRREEEEE EEEEEEEEEE 300 EEEEEEMVGQ NHVLSEEGET LWEINAEPLD ENSENPDGSA LPWLELGTQC S

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MAPSTAEPIV DSGSGDSQRS IPTPFLTKTY QLVDDSAVDD FISWNDDGST FIVWRPAEFA  60
RDLLPKYFKH NNFSSFVRQL NTYGFRKVVP DRWEFANDCF RRGEKGLLRD IQRRKVALSS  120
ATTTTTTAVS GPVLVAASPS VVAHVISPSN SGEEQVTSSN SSPMAFQRGT SCTTSPELMG  180
ENERLRKENM QLSHELTQLK GLCNNILSMM TNYASGHHHQ LESVSVRDMK ALELLPARQA  240
MKDDGPVSDG VQEVRLKVEE TTTASPAKRT APKLFGVSIG VKRRREEEEE EEEEEEEEEE  300
EEEEEEMVGQ NHVLSEEGET LWEINAEPLD ENSENPDGSA LPWLELGTQC S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11660.1	2e-95	HSF family protein