PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022922191.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 252aa    MW: 28218.9 Da    PI: 6.931
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022922191.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.00024426123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    + C+ C ksF +   +  H++ H
  XP_022922191.1  4 HICNLCFKSFANGRAYAAHMKAH 26
                    68*******************98 PP
2zf-C2H211.10.0012141162223
                     EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                     kC++C+k F++   L +H + +
  XP_022922191.1 141 KCGKCTKLFRSYRALFSHEKIC 162
                     7*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MESHICNLCF KSFANGRAYA AHMKAHLTAA MAPPLPPPTP PETHGGVPSS FSSYSADDDE  60
FREDPKRIFN ILLQDTESET ESTNPSRKRS KKYRKPPLEP SSSVSDTSPE EDLAMSLMML  120
SRDRWMKPET KSLTGIKRKK KCGKCTKLFR SYRALFSHEK ICQLETELDE EQEEHEEFKN  180
GGNRRVFKCP FCFKLFGSGQ ALGGHKRSHV VSSENAAVTV NASVSLKLEI SLIDLNLPAP  240
IEEDDYSVVS DA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.15e-32C2H2 family protein