PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022922104.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C2H2 | ||||||||
Protein Properties | Length: 253aa MW: 27301.1 Da PI: 5.805 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.4 | 0.00046 | 94 | 116 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H XP_022922104.1 94 FSCNYCRRKFFSSQALGGHQNAH 116 89*****************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
METLDFNIEA AKDSEPSSSQ EANPDHSNTG TASSSCPPSS SEVAVAVADA VPISLDLTLQ 60 FNSNDIESKG DGDGENHGET NGNKSSSAST PRVFSCNYCR RKFFSSQALG GHQNAHKRER 120 TMAKRVTRMG MFFDRYGSLA SLPLHGSALR SLGIEAHGAL HQTVLASDHR PYPGRSVGAK 180 FEHSTFGFPT FVEEYEDDVG MFWPGSFRQV AAKVDSSLGP LKSTVQISDS EFGKTIPPPP 240 RTEESSPDLT LRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66140.1 | 9e-35 | C2H2 family protein |