PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022921453.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | bHLH | ||||||||
Protein Properties | Length: 561aa MW: 61258.9 Da PI: 8.5701 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 53.1 | 5.7e-17 | 258 | 307 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f+ Lr l+P++ ++K +Ka+ L ++v+YI+ Lq XP_022921453.1 258 RSKHSATEQRRRSKINDRFQMLRGLIPHS----DQKRDKASFLLEVVDYIQFLQ 307 889*************************9....9*******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 561 aa Download sequence |
MELPQPRPFG AEGSKSTHDF LSLYTHSSPQ LDPRPSQQGG YLKTHDFLQP QERIRKGSTK 60 EETDVETPPP PAPPPSVEHV LPGGIGTYSI SHVSYLDQRV LPKPEGSVFT GARSSSSAER 120 NDENSNGSSF AGAGSGFTLW EECASKKGKT GKENIVGDRP HEPRASASQW TASVERPSQS 180 SSNNHHNAFS CLSSSQPTGT KNPTFMEMLK SAKSTSQDEE LDDDGDFVIK KETSTANKGG 240 LRIKVDGNSS DQKANTPRSK HSATEQRRRS KINDRFQMLR GLIPHSDQKR DKASFLLEVV 300 DYIQFLQEKV QKYEGSYQEW NREMAKLVPL RNNQRSADVY NDQSRGMSSG SVPALVLAAK 360 FVEKNTPLSP IVPGSSHNVV DSDTGSASTL KAVDRHSGRT SNALPFPTIV PPKLYASTRD 420 GSVVPQHPKQ FASEKDHPSL RPQIRSCEAR CHNSDVAVAS EMQKEQDLTI EGGTINISSV 480 YSQGLLNTLT HALQSSGVDL SQSRISVQIE LGKRATRRAV SPTSIVKDVD IPINDMATTH 540 SRASATEDSE RATKKLKTAE S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08130.2 | 1e-103 | bHLH family protein |