PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022921406.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | LFY | ||||||||
Protein Properties | Length: 386aa MW: 43389.1 Da PI: 6.6806 | ||||||||
Description | LFY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FLO_LFY | 626.4 | 4.8e-191 | 1 | 374 | 1 | 386 |
FLO_LFY 1 mdpeafsaslfkwdpraaaaapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslse 95 mdpea+sa+lfkwdpr ++ + + a +++ + + l +leelf+ayG+ry+t+akiaelGftvstL+dmkdeel+d+m+sls+ XP_022921406.1 1 MDPEALSATLFKWDPRGVVGGGSG-ASLPAPLPP----YSLRPRELGLGGLEELFQAYGIRYYTAAKIAELGFTVSTLLDMKDEELEDMMNSLSH 90 9***************99855443.333333333....34566777799********************************************** PP FLO_LFY 96 ifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeet..aldalsqeglseepvqeekeaagsggeglgeaelvaaeekkseeekkka 188 ifr++llvGeryGikaa+raerrrl++e + ++rr+lls+d++t +ldalsqeglseepvq+eke +gsgg+g g++e+vaa+e + kk+ XP_022921406.1 91 IFRWELLVGERYGIKAAIRAERRRLDDEIDPSRRRHLLSNDTTTnvVLDALSQEGLSEEPVQQEKEVVGSGGGG-GAWEAVAAAEMR-----KKQ 179 ***************************9999*******9999887799**********************9998.999999998432.....333 PP FLO_LFY 189 skkkqkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtkvtn 283 ++++ +kk+++ +ed+ee+e ee+++ + +erqrehPfivtepgevargkknGLDYLf+LyeqCr+fL+qvq+iakerGekcP kvtn XP_022921406.1 180 ---RRRNVSKKKQVIVMEEDNEETEGGGEEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCRQFLIQVQNIAKERGEKCPNKVTN 271 ...2222222222344667777888888888889999********************************************************** PP FLO_LFY 284 qvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLrqLC 378 qvfryakkagasyinkPkmrhYvhCYalhcLdeeasn+lrr fkergenvGawrqacykplvaiaa qgwdida+fnahp+L+iWYvPtkLrqLC XP_022921406.1 272 QVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEASNSLRRVFKERGENVGAWRQACYKPLVAIAAAQGWDIDAIFNAHPHLAIWYVPTKLRQLC 366 *********************************************************************************************** PP FLO_LFY 379 hlerskas 386 h+er++++ XP_022921406.1 367 HAERNSST 374 ****9875 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 386 aa Download sequence |
MDPEALSATL FKWDPRGVVG GGSGASLPAP LPPYSLRPRE LGLGGLEELF QAYGIRYYTA 60 AKIAELGFTV STLLDMKDEE LEDMMNSLSH IFRWELLVGE RYGIKAAIRA ERRRLDDEID 120 PSRRRHLLSN DTTTNVVLDA LSQEGLSEEP VQQEKEVVGS GGGGGAWEAV AAAEMRKKQR 180 RRNVSKKKQV IVMEEDNEET EGGGEEEENM EVSERQREHP FIVTEPGEVA RGKKNGLDYL 240 FHLYEQCRQF LIQVQNIAKE RGEKCPNKVT NQVFRYAKKA GASYINKPKM RHYVHCYALH 300 CLDEEASNSL RRVFKERGEN VGAWRQACYK PLVAIAAAQG WDIDAIFNAH PHLAIWYVPT 360 KLRQLCHAER NSSTASTSAA AALLPF |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 176 | 182 | RKKQRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G61850.1 | 1e-147 | LFY family protein |