PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022921405.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | LFY | ||||||||
Protein Properties | Length: 387aa MW: 43517.2 Da PI: 6.6806 | ||||||||
Description | LFY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FLO_LFY | 620.1 | 3.9e-189 | 1 | 375 | 1 | 386 |
FLO_LFY 1 mdpeafsaslfkwdpraaaaapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslse 95 mdpea+sa+lfkwdpr ++ + + a +++ + + l +leelf+ayG+ry+t+akiaelGftvstL+dmkdeel+d+m+sls+ XP_022921405.1 1 MDPEALSATLFKWDPRGVVGGGSG-ASLPAPLPP----YSLRPRELGLGGLEELFQAYGIRYYTAAKIAELGFTVSTLLDMKDEELEDMMNSLSH 90 9***************99855443.333333333....34566777799********************************************** PP FLO_LFY 96 ifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeet..aldalsqeglseepvqeekeaagsggeglgeaelvaaeekkseeekkka 188 ifr++llvGeryGikaa+raerrrl++e + ++rr+lls+d++t +ldalsqeglseepvq+eke +gsgg+g g++e+vaa+e + kk+ XP_022921405.1 91 IFRWELLVGERYGIKAAIRAERRRLDDEIDPSRRRHLLSNDTTTnvVLDALSQEGLSEEPVQQEKEVVGSGGGG-GAWEAVAAAEMR-----KKQ 179 ***************************9999*******9999887799**********************9998.999999998432.....333 PP FLO_LFY 189 skkkqkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtk.vt 282 ++++ +kk+++ +ed+ee+e ee+++ + +erqrehPfivtepgevargkknGLDYLf+LyeqCr+fL+qvq+iakerGekcP k vt XP_022921405.1 180 ---RRRNVSKKKQVIVMEEDNEETEGGGEEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCRQFLIQVQNIAKERGEKCPNKqVT 271 ...2222222222344667777888888888889999*****************************************************987** PP FLO_LFY 283 nqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLrqL 377 nqvfryakkagasyinkPkmrhYvhCYalhcLdeeasn+lrr fkergenvGawrqacykplvaiaa qgwdida+fnahp+L+iWYvPtkLrqL XP_022921405.1 272 NQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEASNSLRRVFKERGENVGAWRQACYKPLVAIAAAQGWDIDAIFNAHPHLAIWYVPTKLRQL 366 *********************************************************************************************** PP FLO_LFY 378 Chlerskas 386 Ch+er++++ XP_022921405.1 367 CHAERNSST 375 *****9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 387 aa Download sequence |
MDPEALSATL FKWDPRGVVG GGSGASLPAP LPPYSLRPRE LGLGGLEELF QAYGIRYYTA 60 AKIAELGFTV STLLDMKDEE LEDMMNSLSH IFRWELLVGE RYGIKAAIRA ERRRLDDEID 120 PSRRRHLLSN DTTTNVVLDA LSQEGLSEEP VQQEKEVVGS GGGGGAWEAV AAAEMRKKQR 180 RRNVSKKKQV IVMEEDNEET EGGGEEEENM EVSERQREHP FIVTEPGEVA RGKKNGLDYL 240 FHLYEQCRQF LIQVQNIAKE RGEKCPNKQV TNQVFRYAKK AGASYINKPK MRHYVHCYAL 300 HCLDEEASNS LRRVFKERGE NVGAWRQACY KPLVAIAAAQ GWDIDAIFNA HPHLAIWYVP 360 TKLRQLCHAE RNSSTASTSA AAALLPF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 176 | 182 | RKKQRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61850.1 | 1e-145 | LFY family protein |