PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022921401.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 336aa MW: 37910.8 Da PI: 7.8481

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022921401.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.3	2.1e-11	154	197	7	55
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + ErrRRdriN+++ L++l+P++ K + a+ L +++Y+k+L+ XP_022921401.1 154 QSERRRRDRINQKLKDLQKLVPNR-----SKTDRASLLDDTIQYLKQLK 197 68*******************8.....6***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MNQWIVPKWN QSQQHEDASR SSHVHFPHKN TTFSHNLVPM AKYEAIERTW ESGDQEAAVD 60 GHGEVVLQMA STKHSWGQSE DTLESIVHSS LLRKRTRSNP EGKDETFMSG AFLESHRSFK 120 AKNSIEDLAP DDGSEDEHNT KRKTSGSCSI RRTQSERRRR DRINQKLKDL QKLVPNRSKT 180 DRASLLDDTI QYLKQLKAQV QFMCSIRSDV PQMIVPLGMQ QQQQQLQVSL LAARMGLLDT 240 ASMASSSSSF PCAAACSPTL LPSIISSTKP KYKLSTSAFV PPTDPFCTLL AQSMDMDLYS 300 KMVTLYCQEV NRTPRQASKL MESQCVEGIE EDMHQS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	141	160	KRKTSGSCSIRRTQSERRRR
2	156	161	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61270.1	5e-19	bHLH family protein