PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022921390.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 141aa    MW: 15975.1 Da    PI: 8.5186
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022921390.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.59.9e-053658123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C++C++ F ++  L  H++ H
  XP_022921390.1 36 FSCNYCKRKFYSSQALGGHQNAH 58
                    89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    
MEFKHHQQLN LELVLEPSSP SSSAPVSPNC EAARVFSCNY CKRKFYSSQA LGGHQNAHKL  60
ERTLAKKSRE MRAYRGDHES NNVMMKSSHL WKVETLTAPS PLVIDGGRDQ IRAFPADQNL  120
LLLHHHHQAD DIGHLDLSLR L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57520.17e-22C2H2 family protein