PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR97923.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | bHLH | ||||||||
Protein Properties | Length: 234aa MW: 26052.7 Da PI: 3.9911 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.7 | 4.9e-09 | 113 | 154 | 8 | 54 |
HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 Er+RR+r+N+ + Lr+l+P + K++K +iL A Y+++L RWR97923.1 113 SERNRRKRLNQQLLALRSLVPCiS------KMDKRSILMDAATYLQNL 154 6*********************66......****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MEFENLNFWS PESGDSDGVF RQIPDCPSAI FSPIQCDYGS YLEYMEMELL QGGAREPMMM 60 MMEEEEEDKS GGGNEEEEPE EDDNGRGEGG VVLDGGATDD GILGNGGCKN LLSERNRRKR 120 LNQQLLALRS LVPCISKMDK RSILMDAATY LQNLHREIEE VKREIATQET SDTSTTSSES 180 NLPSPEETIQ CNESSPPQHQ ILNIDIEEMD ERTFAVKVVF QEGSRGSVSG SVHD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28160.1 | 8e-10 | bHLH family protein |