PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR97453.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

G2-like

Protein Properties

Length: 449aa MW: 50347.4 Da PI: 8.8811

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR97453.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.4	1.2e-31	56	109	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+++AtPk +l++m+v gL+++hvkSHLQ+YR+ RWR97453.1 56 PRLRWTPDLHLSFVHAVERLGGQDRATPKLVLQMMNVRGLSIAHVKSHLQMYRS 109 8****************************************************7 PP
2	Myb_DNA-binding	48.4	2.1e-15	57	108	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+av++lGg t+k++ ++m+ g++ ++ks++q+y+ RWR97453.1 57 RLRWTPDLHLSFVHAVERLGGQdraTPKLVLQMMNvRGLSIAHVKSHLQMYR 108 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MVDVSDGEKS KENSRSPKKR PAIDLNEEVK DPEVNTSDES ERPTSAVRQY IRSKMPRLRW 60 TPDLHLSFVH AVERLGGQDR ATPKLVLQMM NVRGLSIAHV KSHLQMYRSK KLDDSGQVIT 120 RGSGCLSEIF FQRAGFYQHF AVEKGSFFAS KNVHEPKSLY SHLQQSLSHH PFEFKASQLR 180 QQEWAFNQHP IVGPVTHSCT NPGPAKGLIH DLVFRNGGKP SSSHLFDVRN AITGDGSMRS 240 HQFIEEERWP RHETLRNQGN NGNARADLEW IGSNSQLPSR SFISMPVSVD PICNTRSSGS 300 NSRLQSHSNH VDSVVMADRL ESKFKPPLGL QLRAQSEKKP MPMTQKNPQI DDNGEIKNTI 360 ANEKEWLPNL ELSLTHNLGD DGGDAKHCEN GRGIVRAPSL SLSLPSSRLQ GHPSEKNEDN 420 YIPELQFSQT DGSNKATMRL STLDLTMSI

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MVDVSDGEKS KENSRSPKKR PAIDLNEEVK DPEVNTSDES ERPTSAVRQY IRSKMPRLRW  60
TPDLHLSFVH AVERLGGQDR ATPKLVLQMM NVRGLSIAHV KSHLQMYRSK KLDDSGQVIT  120
RGSGCLSEIF FQRAGFYQHF AVEKGSFFAS KNVHEPKSLY SHLQQSLSHH PFEFKASQLR  180
QQEWAFNQHP IVGPVTHSCT NPGPAKGLIH DLVFRNGGKP SSSHLFDVRN AITGDGSMRS  240
HQFIEEERWP RHETLRNQGN NGNARADLEW IGSNSQLPSR SFISMPVSVD PICNTRSSGS  300
NSRLQSHSNH VDSVVMADRL ESKFKPPLGL QLRAQSEKKP MPMTQKNPQI DDNGEIKNTI  360
ANEKEWLPNL ELSLTHNLGD DGGDAKHCEN GRGIVRAPSL SLSLPSSRLQ GHPSEKNEDN  420
YIPELQFSQT DGSNKATMRL STLDLTMSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	4e-38	G2-like family protein