PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR97345.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 571aa MW: 62585.7 Da PI: 7.1279

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR97345.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.5	9.1e-31	319	377	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ RWR97345.1 319 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRSILITTYEGNHNHP 377 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 571 aa Download sequence
MDRNGGLTID SSSLRFFPTK PKSFFSTQPK WNQTHELMDT NDRFSGVGFS PKKRVDEMDF 60 FAVKKTARVQ EFDDVKAPTT SVCNVKKEDL IEEGRVNSNV NTGLHLLTAN TGSDQSMVDD 120 GISSEEKGKK SELSKLQAEL FQINEENQRL KGLLREVSNN YNSLQMHLYT LMQQQNQKIE 180 EHQPHQSTDE KKQGVGGELI VPRQFMDLGP AATGETDEPS QSTSEGRSQE HSGSPHNNVE 240 VVSKDLNLRN SNGEIVPYDQ ERLNVKEGSP DQTSQDWTSN KVPKLTNSKN GATDQSAAEA 300 TMRKARVSVR ARSEAPMITD GCQWRKYGQK MAKGNPCPRA YYRCTMAAGC PVRKQVQRCA 360 EDRSILITTY EGNHNHPLPP AAMAMASTTS AAASMLLSGS MSSAEGLMNP NFLARTILPC 420 SSSNMATISA SAPFPTVTLD LTHSPNPLQF QRPQTQFQVP FPNGAPQGIP SQMLPQIFGQ 480 ALFNQSKFSG LQTSSNTEAT QFMGHPQPQL PPPPPSFTDT VSAATAAITA DPNFTAALAA 540 AISSIISGAQ TGNTNHQQQQ QQQQQQQKFQ N

Sequence ? help Back to Top

Protein Sequence Length: 571 aa Download sequence

MDRNGGLTID SSSLRFFPTK PKSFFSTQPK WNQTHELMDT NDRFSGVGFS PKKRVDEMDF  60
FAVKKTARVQ EFDDVKAPTT SVCNVKKEDL IEEGRVNSNV NTGLHLLTAN TGSDQSMVDD  120
GISSEEKGKK SELSKLQAEL FQINEENQRL KGLLREVSNN YNSLQMHLYT LMQQQNQKIE  180
EHQPHQSTDE KKQGVGGELI VPRQFMDLGP AATGETDEPS QSTSEGRSQE HSGSPHNNVE  240
VVSKDLNLRN SNGEIVPYDQ ERLNVKEGSP DQTSQDWTSN KVPKLTNSKN GATDQSAAEA  300
TMRKARVSVR ARSEAPMITD GCQWRKYGQK MAKGNPCPRA YYRCTMAAGC PVRKQVQRCA  360
EDRSILITTY EGNHNHPLPP AAMAMASTTS AAASMLLSGS MSSAEGLMNP NFLARTILPC  420
SSSNMATISA SAPFPTVTLD LTHSPNPLQF QRPQTQFQVP FPNGAPQGIP SQMLPQIFGQ  480
ALFNQSKFSG LQTSSNTEAT QFMGHPQPQL PPPPPSFTDT VSAATAAITA DPNFTAALAA  540
AISSIISGAQ TGNTNHQQQQ QQQQQQQKFQ N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G04450.1	1e-123	WRKY family protein