PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR97118.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 263aa MW: 29349.9 Da PI: 9.1396

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR97118.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.6	5.9e-08	15	60	3	46
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 +W+ d+l+ +a +++ + +W++Ia++++ g+ + ++++++ RWR97118.1 15 AWSRTQDKLFERALVLFPEDtpdRWERIAAEVP-GKDPTEVRDHYEV 60 8******************************.********965 PP
2	Myb_DNA-binding	43.2	9.3e-14	115	159	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + +++G+g+W++I+r Rt+ q+ s+ qky RWR97118.1 115 PWTEEEHRLFLIGLQKYGKGDWRSISRNAVVSRTPTQVASHAQKY 159 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MLRGDYLAMI GSSSAWSRTQ DKLFERALVL FPEDTPDRWE RIAAEVPGKD PTEVRDHYEV 60 LVHDVGEIDS GRVAVPSYTE NSFTPEWWGE EGPSQISFGG GKGKGAENER KKGVPWTEEE 120 HRLFLIGLQK YGKGDWRSIS RNAVVSRTPT QVASHAQKYY LRLNSVKKEK KRSSIHDITT 180 VQSGQVAQPS EQRLANAVQG PTQQPMGPPK FSQNPALQPM GPPKYSNLPH SQAMGALKFA 240 EGPYLGQFRE QGSSGYQQFG FPM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	1e-75	MYB family protein