PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR96936.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

ARR-B

Protein Properties

Length: 595aa MW: 66618.9 Da PI: 6.2872

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR96936.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	61.3	1.9e-19	194	260	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGG.......s.....ekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k r++W+ eLH++Fv+av+++G + Pk+il+lm+v+gLt+e+v+SHLQkYRl RWR96936.1 194 KVRVVWSVELHKKFVSAVNHIGFdilvrsvMskfvlAEVGPKKILDLMNVPGLTRENVASHLQKYRL 260 679****************6422222221111113456************************8 PP
2	Myb_DNA-binding	36.1	1.5e-11	196	259	1	48
TSSS-HHHHHHHHHHHHHTTTT...............-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...............tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+ G + +k+I m+ g+t++++ s++qky+ RWR96936.1 196 RVVWSVELHKKFVSAVNHIGFDilvrsvmskfvlaevGPKKILDLMNvPGLTRENVASHLQKYR 259 678************************************************************7 PP
3	Response_reg	81.9	2e-27	10	117	1	108
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+p+ +++l+++l++ y ev+++ +++al++l+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ Ga RWR96936.1 10 VLVVDDDPTWLKILEKMLKRCSY-EVTTCGRARAALDMLRERKdrFDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGAC 104 89*******************.***********888778******************6644.8******************** PP EEEESS--HHHHH CS Response_reg 96 dflsKpfdpeelv 108 d+l Kp+ ++el+ RWR96936.1 105 DYLLKPIRMKELR 117 ******99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 595 aa Download sequence
MDGFPAGLRV LVVDDDPTWL KILEKMLKRC SYEVTTCGRA RAALDMLRER KDRFDIVISD 60 VNMPDMDGFK LLEHVGLEMD LPVIMMSVDG ETSRVMKGVQ HGACDYLLKP IRMKELRIIW 120 QHVYRKKINE GKENGSHDHE GNEGSQMMKN GLDDFEDEFF LSDSDPNCTK KRKEMENEAS 180 DGQEFNSNPG AVKKVRVVWS VELHKKFVSA VNHIGFDILV RSVMSKFVLA EVGPKKILDL 240 MNVPGLTREN VASHLQKYRL YLSRLQRRNE PNTSFCGINP DFSSKDHPGK FGLQSSMTTQ 300 HNSPYSYGYS GNNGIVQDVI PEISEEKVKS IGSFFPVTEA KSSLRGDVPA SQKSNSVPQL 360 GIVCPFGGTV PDADSTSFGS SISQQQPWSG KGSVVQLKQQ AKEDHKPDLE YPHVKLHSQE 420 HHFQVDHKKR TISANGRTYI TDTDATGPSE IEPLCTDYKR GHVRSGCLTD SFSASLEHKI 480 AKPQEFGTRP LTSSSSSTKN HNPSQHSING WGSPQSSTLK NGSFSTTSHE DLQLHSLQSY 540 GCFENVWLDE MEFLELSASS ISELQGYVYD GLRFNCDYQG DLIEYPVIDE GVFIA

Sequence ? help Back to Top

Protein Sequence Length: 595 aa Download sequence

MDGFPAGLRV LVVDDDPTWL KILEKMLKRC SYEVTTCGRA RAALDMLRER KDRFDIVISD  60
VNMPDMDGFK LLEHVGLEMD LPVIMMSVDG ETSRVMKGVQ HGACDYLLKP IRMKELRIIW  120
QHVYRKKINE GKENGSHDHE GNEGSQMMKN GLDDFEDEFF LSDSDPNCTK KRKEMENEAS  180
DGQEFNSNPG AVKKVRVVWS VELHKKFVSA VNHIGFDILV RSVMSKFVLA EVGPKKILDL  240
MNVPGLTREN VASHLQKYRL YLSRLQRRNE PNTSFCGINP DFSSKDHPGK FGLQSSMTTQ  300
HNSPYSYGYS GNNGIVQDVI PEISEEKVKS IGSFFPVTEA KSSLRGDVPA SQKSNSVPQL  360
GIVCPFGGTV PDADSTSFGS SISQQQPWSG KGSVVQLKQQ AKEDHKPDLE YPHVKLHSQE  420
HHFQVDHKKR TISANGRTYI TDTDATGPSE IEPLCTDYKR GHVRSGCLTD SFSASLEHKI  480
AKPQEFGTRP LTSSSSSTKN HNPSQHSING WGSPQSSTLK NGSFSTTSHE DLQLHSLQSY  540
GCFENVWLDE MEFLELSASS ISELQGYVYD GLRFNCDYQG DLIEYPVIDE GVFIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-110	ARR-B family protein