PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR96811.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | DBB | ||||||||
Protein Properties | Length: 239aa MW: 26224.8 Da PI: 4.7764 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 21.2 | 5.9e-07 | 4 | 44 | 5 | 39 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e+ +++ C ++ lC +C e H+ H++ RWR96811.1 4 QCDVCEKAPASVICCADEAALCVNCDIEVHEAnklaskHQR 44 7*****************************76677777765 PP | |||||||
2 | zf-B_box | 26.7 | 1.1e-08 | 53 | 85 | 2 | 34 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeH 34 + ++C+ ++ek + +fC +++ l+C+dC + H RWR96811.1 53 KLPRCDICQEKAAFIFCVEDRALFCRDCDEPVH 85 789*************************99877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MKIQCDVCEK APASVICCAD EAALCVNCDI EVHEANKLAS KHQRLLLQSL SNKLPRCDIC 60 QEKAAFIFCV EDRALFCRDC DEPVHLPGSL SGNHQRLLAT GIQVGLSSIC SKDSETGHPE 120 PPKRSSSKPV MKVPASQPHA FMPSSWAVDD LLQFSDVEAE DKKEAIGFGD LDWITDIGLY 180 NEQVPQSQEA LTAAEVPQLP FTPASNATSY KPTKPFSSHK KPRLQISDDE EFFIVPDLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06040.1 | 2e-97 | DBB family protein |