PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR96742.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 217aa MW: 24413.4 Da PI: 5.493 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.8 | 8.9e-19 | 102 | 154 | 2 | 54 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 rk+ +++keq +Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ RWR96742.1 102 RKKLRLSKEQSAILEESFKEHNTLNPKQKIALAKQLNLRPRQVEVWFQNRRAR 154 778899**********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 83.4 | 3.4e-27 | 102 | 169 | 1 | 69 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkra 69 +kk+rlskeq+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRAR +E++ + L+r+ RWR96742.1 102 RKKLRLSKEQSAILEESFKEHNTLNPKQKIALAKQLNLRPRQVEVWFQNRRARCCENLTEENRR-LQRE 169 69***************************************************99888887644.4444 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MDGEDLQLSL SLQTIETDLQ ISTQPSTSDV EMRMNPRAID MNRIPTPTPS GFDVEDVVSS 60 PNSSGGAFVA GKRTSAEREE NEGGGGGGGG RMSDEEEGET TRKKLRLSKE QSAILEESFK 120 EHNTLNPKQK IALAKQLNLR PRQVEVWFQN RRARCCENLT EENRRLQREL LELRALKRSP 180 HFYMPVPATT LTMCPSCERV ETSENQTPIP SRQQIRL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 101 | 107 | TRKKLRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06710.1 | 1e-40 | HD-ZIP family protein |