PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR96722.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NAC
Protein Properties Length: 333aa    MW: 38207.1 Da    PI: 9.4994
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR96722.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM176.85.8e-55521771128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 lppGfrFhPtdeel+++yL++kv++ ++ + ++i++vd++k+ePwdLp k++ +ekewyfF  rd+ky+tg r+nrat++gyWk+tgkdke+++ +g  
  RWR96722.1  52 LPPGFRFHPTDEELITFYLTRKVSDFNFVT-RAITDVDLNKCEPWDLPGKASMGEKEWYFFNLRDRKYPTGLRTNRATEAGYWKTTGKDKEIFH-SGVM 148
                 79*************************988.89***************988999****************************************.999* PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                 vg+kktLvfykgrap+gek++Wvmheyrl
  RWR96722.1 149 VGMKKTLVFYKGRAPRGEKSNWVMHEYRL 177
                 ***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MAFWLIETTI PHILSSTGIL RRYPAKTQQY SSSSFQLFFF FLFCSIEMEE NLPPGFRFHP  60
TDEELITFYL TRKVSDFNFV TRAITDVDLN KCEPWDLPGK ASMGEKEWYF FNLRDRKYPT  120
GLRTNRATEA GYWKTTGKDK EIFHSGVMVG MKKTLVFYKG RAPRGEKSNW VMHEYRLQSK  180
RNGWFCRVFQ KSSSAKKPPS SPASLPHLVE SSCDTTLMNE IEEIDMPMPN LNSLVSFSSD  240
FSSVSTNNNN IIPSNNNNNN HNNNSNINNG SGSNNNNMNM NMNNEMNMNW GFTNATTNHP  300
SLNWPSGLLN SSFFNKFVNF KGIAVCLSTP RRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.16e-87NAC family protein