PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR96632.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NAC
Protein Properties Length: 327aa    MW: 37461.5 Da    PI: 4.7959
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR96632.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM145.33.2e-45101861129
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk................................................kv 51 
                 lppGfrF P+deelv++yL k+v+++  +l +++ evd++++ePw+Lp                                                 ++
  RWR96632.1  10 LPPGFRFYPRDEELVCHYLYKRVANEMPSL-DTMVEVDLHTCEPWQLPGdhfmgipeisiwmempvkensvtfrsdvletfqtfllllldsfemgsdAA 107
                 79**********************999888.89***************5589*********************************99999997766533 PP

         NAM  52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
                   + +ewyfFs rd+kyatg r+nratk+gyWkatgkd++v++  +++ vg++ktLvfy +rap+g+kt Wvmhe+rle
  RWR96632.1 108 MLGANEWYFFSFRDRKYATGVRANRATKAGYWKATGKDRPVIDPtTEAIVGMRKTLVFYLERAPNGKKTGWVMHEFRLE 186
                 33788**************************************966777***************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MGLRNIEATL PPGFRFYPRD EELVCHYLYK RVANEMPSLD TMVEVDLHTC EPWQLPGDHF  60
MGIPEISIWM EMPVKENSVT FRSDVLETFQ TFLLLLLDSF EMGSDAAMLG ANEWYFFSFR  120
DRKYATGVRA NRATKAGYWK ATGKDRPVID PTTEAIVGMR KTLVFYLERA PNGKKTGWVM  180
HEFRLETPHT PPKEDWVLCR VFHKRKKEPS TQYRLDVEQE TIGCSSANMG SCTHPIYQSM  240
PYNKQMVSYS NEPHQEESNS PPNTMPNLAV LHYNFLEDTP MIGMNGRGGD EYGFLLDLGL  300
DDENMGDGEP LDLGETILDN GREKGFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.12e-68NAC family protein