PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR96507.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

bZIP

Protein Properties

Length: 433aa MW: 45832.2 Da PI: 8.9612

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR96507.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	64.2	2.3e-20	291	352	1	62
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 e+elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv+++ eN++Lk+e+++l+++ +kl+ e RWR96507.1 291 ERELKRERRKQSNRESARRSRLRKQAETEELATKVESMNVENMTLKNEINRLRENLEKLRRE 352 89********************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MGKTEAGAPK SEKPYSPVQE QGQPTNVPAY PDWAAIQAYY GHGVGLPPYF SSAMASGHAL 60 HPYMWGPQPM MTPYGAPYAA IYPHGGLYAH PSVPIGSHTH GHGITSSGTS DNVASLSSME 120 TPAKSSGNKG LGLMKKLKGF DGLAVSTGCG NAENAAGDEA HGVSQSVESG GQGSSDGSDG 180 NTALGGNQMQ RKRSCENLTI KGVDESIDIQ NTHGVEPIRS SSKSMGVTMA PASVARQPVG 240 TVPLHCMAPG MEFSGPAGLK AKSSAAAIPA VASGVVPAQD RVPSELQPKD ERELKRERRK 300 QSNRESARRS RLRKQAETEE LATKVESMNV ENMTLKNEIN RLRENLEKLR REHSALKEKL 360 KDAQLGEAGH TAIQKRESQV GPPVAIENLL SRVNNSGSVS RSAQRESEAH ENSTGKLYQL 420 LESKSRPDAV AAG

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MGKTEAGAPK SEKPYSPVQE QGQPTNVPAY PDWAAIQAYY GHGVGLPPYF SSAMASGHAL  60
HPYMWGPQPM MTPYGAPYAA IYPHGGLYAH PSVPIGSHTH GHGITSSGTS DNVASLSSME  120
TPAKSSGNKG LGLMKKLKGF DGLAVSTGCG NAENAAGDEA HGVSQSVESG GQGSSDGSDG  180
NTALGGNQMQ RKRSCENLTI KGVDESIDIQ NTHGVEPIRS SSKSMGVTMA PASVARQPVG  240
TVPLHCMAPG MEFSGPAGLK AKSSAAAIPA VASGVVPAQD RVPSELQPKD ERELKRERRK  300
QSNRESARRS RLRKQAETEE LATKVESMNV ENMTLKNEIN RLRENLEKLR REHSALKEKL  360
KDAQLGEAGH TAIQKRESQV GPPVAIENLL SRVNNSGSVS RSAQRESEAH ENSTGKLYQL  420
LESKSRPDAV AAG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	308	314	RRSRLRK
2	308	315	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.2	2e-40	bZIP family protein