PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR96421.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

Nin-like

Protein Properties

Length: 1020aa MW: 112354 Da PI: 4.8397

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR96421.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	90.6	1.3e-28	621	672	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yF++++kdAAk+Lgvc+T++KriCR++GI+RWP+Rki+++ RWR96421.1 621 AEKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRHHGISRWPSRKINKV 672 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1020 aa Download sequence
MEEKEEKMSE PEGEEDPTVH PNLQKHPSIG REITDVDLDL DQSWPFDPNP FASIPSSPLI 60 FSFFCPSPSQ YPNFQHLPFS DQQSSPLWGF SDAAEEKPAD SPLDGGFRLP DTSATTDYPA 120 VHSLLGNHME DDGDGKLPPA PLVEDESSDI SCVLKERMMQ ALRYFKESTK QHVLIQVWAP 180 VKNGDHYVLT TSGQPFVLDP HSIGLLKYRT VSLTYVFSVD GESDSDLGLP GRVFQQKLPE 240 WTPNVQFYSC KEFSRLDHAL HYNVRGTLAL PVFEPSGQSC VGVIELIMTA QKIHYALDVD 300 KVCRALEAVN LKSSEVLDHP NIQICNEGRQ AALAEILQIL AVVCETHKLP LAQTWVPCRH 360 RSVLANGAGS EKSCTSFDGR CMGKVYMSTS DIAFYIVDAN MWGFRDACAE HHLQKEQGVA 420 GRAYSSYRSC FSSDVTQFSK TEYPLVHYAR MFGLKSCLAI CLQSKHTGSD DYILEFFFPP 480 NCMDSGDQQC LLDSILTTMK QSFQSLKTVS ENELQEEKSI EIIETSMNVK PDSIVPLNQN 540 QSCAVYCEAF PQTETATKVN ELGFNNLQEG EVLPDLLEKQ FTGEDEPMDD NELINIDGSL 600 SGVPSPENRS LKTLERKRGK AEKSISLEVL QQYFAGSLKD AAKSLGVCPT TMKRICRHHG 660 ISRWPSRKIN KVNRSLSKLR RVIESVQGSE GALNLVTLTS SIPAAINSIS WPVNFTGATQ 720 QLGNAPCDLQ QKGGRESPTC IKPESGHHGK NGETVLEGCS RLSADQELNL DGSDLQLELG 780 MGSSLLKSGS TEESTEMPTS QDLYHGTAEN GTHMSNPSVS SIREQQLNIS GCLGMTTQPT 840 KQPSLPTPCS IWDASIATQP KTLMSGLLIE GSGSCKDFKD LFNSIVEGCT DSGGVKPVCT 900 KPDQLRSLPC TSTLPHVSAT QDMRSVTIKA SYKEDIIRFR LLITSTVLEL KMEVSKRLKL 960 EVGTFDIKYL DDDNEWVLLA CDADLQECMD ISRSSGGHVI RLLVHDLVPN FGSSCGSSGD

Sequence ? help Back to Top

Protein Sequence Length: 1020 aa Download sequence

MEEKEEKMSE PEGEEDPTVH PNLQKHPSIG REITDVDLDL DQSWPFDPNP FASIPSSPLI  60
FSFFCPSPSQ YPNFQHLPFS DQQSSPLWGF SDAAEEKPAD SPLDGGFRLP DTSATTDYPA  120
VHSLLGNHME DDGDGKLPPA PLVEDESSDI SCVLKERMMQ ALRYFKESTK QHVLIQVWAP  180
VKNGDHYVLT TSGQPFVLDP HSIGLLKYRT VSLTYVFSVD GESDSDLGLP GRVFQQKLPE  240
WTPNVQFYSC KEFSRLDHAL HYNVRGTLAL PVFEPSGQSC VGVIELIMTA QKIHYALDVD  300
KVCRALEAVN LKSSEVLDHP NIQICNEGRQ AALAEILQIL AVVCETHKLP LAQTWVPCRH  360
RSVLANGAGS EKSCTSFDGR CMGKVYMSTS DIAFYIVDAN MWGFRDACAE HHLQKEQGVA  420
GRAYSSYRSC FSSDVTQFSK TEYPLVHYAR MFGLKSCLAI CLQSKHTGSD DYILEFFFPP  480
NCMDSGDQQC LLDSILTTMK QSFQSLKTVS ENELQEEKSI EIIETSMNVK PDSIVPLNQN  540
QSCAVYCEAF PQTETATKVN ELGFNNLQEG EVLPDLLEKQ FTGEDEPMDD NELINIDGSL  600
SGVPSPENRS LKTLERKRGK AEKSISLEVL QQYFAGSLKD AAKSLGVCPT TMKRICRHHG  660
ISRWPSRKIN KVNRSLSKLR RVIESVQGSE GALNLVTLTS SIPAAINSIS WPVNFTGATQ  720
QLGNAPCDLQ QKGGRESPTC IKPESGHHGK NGETVLEGCS RLSADQELNL DGSDLQLELG  780
MGSSLLKSGS TEESTEMPTS QDLYHGTAEN GTHMSNPSVS SIREQQLNIS GCLGMTTQPT  840
KQPSLPTPCS IWDASIATQP KTLMSGLLIE GSGSCKDFKD LFNSIVEGCT DSGGVKPVCT  900
KPDQLRSLPC TSTLPHVSAT QDMRSVTIKA SYKEDIIRFR LLITSTVLEL KMEVSKRLKL  960
EVGTFDIKYL DDDNEWVLLA CDADLQECMD ISRSSGGHVI RLLVHDLVPN FGSSCGSSGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein