PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR96324.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

G2-like

Protein Properties

Length: 466aa MW: 51532.2 Da PI: 6.7282

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR96324.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.4	3.3e-28	84	140	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGse...kAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+e AtPk +l++m+v gL+++hvkSHLQ+YR+ RWR96324.1 84 PRLRWTPDLHLSFVHAVERLGGQEigaGATPKLVLQMMNVRGLSIAHVKSHLQMYRS 140 8*******************984446**************************7 PP
2	Myb_DNA-binding	47.9	3.2e-15	85	139	1	48
TSSS-HHHHHHHHHHHHHTTTT......-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg......tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+av++lGg t+k++ ++m+ g++ ++ks++q+y+ RWR96324.1 85 RLRWTPDLHLSFVHAVERLGGQeigagaTPKLVLQMMNvRGLSIAHVKSHLQMYR 139 89***************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MVEICDGEKS QGSSTEGESK SPKKRPAIDL NEEAGSDGDD SVTEVAAEEA TGGTGGSSSN 60 NSTTGDGGER RSTTVRQYVR SKMPRLRWTP DLHLSFVHAV ERLGGQEIGA GATPKLVLQM 120 MNVRGLSIAH VKSHLQMYRS KKLDDAGQVI SPTERPFQGS DRFSDMFYQR AGLHQHFRIG 180 NGGHFTAKNV HEHNLLYSHL ERPLSQQPFD FRAGHLRQQE WAFNQHVAAR TSTQSSNDPG 240 PAKGLINDMI FRNGSKPSSS HLFDVRDVIT GNGTVRPHQF IEEKRWPVTQ EVMGIQGNEG 300 RAFSDIEWIR AQSFVRNCKN QFPINLHEST VVASSTDEPK SESPVQLQLQ EQPANKPMAE 360 IEENLGKKAN GELEKRILNE KEWLPNLQLS LRQNLGDGGG KEKCDRNVKE INSALSLSLS 420 LPSSKQQGHP SNDGEPEFQF LGTDSSNKAT TRLSTLDLTM SIQALE

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MVEICDGEKS QGSSTEGESK SPKKRPAIDL NEEAGSDGDD SVTEVAAEEA TGGTGGSSSN  60
NSTTGDGGER RSTTVRQYVR SKMPRLRWTP DLHLSFVHAV ERLGGQEIGA GATPKLVLQM  120
MNVRGLSIAH VKSHLQMYRS KKLDDAGQVI SPTERPFQGS DRFSDMFYQR AGLHQHFRIG  180
NGGHFTAKNV HEHNLLYSHL ERPLSQQPFD FRAGHLRQQE WAFNQHVAAR TSTQSSNDPG  240
PAKGLINDMI FRNGSKPSSS HLFDVRDVIT GNGTVRPHQF IEEKRWPVTQ EVMGIQGNEG  300
RAFSDIEWIR AQSFVRNCKN QFPINLHEST VVASSTDEPK SESPVQLQLQ EQPANKPMAE  360
IEENLGKKAN GELEKRILNE KEWLPNLQLS LRQNLGDGGG KEKCDRNVKE INSALSLSLS  420
LPSSKQQGHP SNDGEPEFQF LGTDSSNKAT TRLSTLDLTM SIQALE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	4e-36	G2-like family protein