PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR96290.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

HSF

Protein Properties

Length: 446aa MW: 50955.5 Da PI: 6.1413

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR96290.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	115	4.9e-36	14	104	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+ye+++d+++++++sws n nsf+v+++ efa+++LpkyFkhsnf+SFvRQLn+YgF+k++ ++ weF++++F +g+++ll++i+ RWR96290.1 14 FLTKTYEMVDDPSTNSVVSWSPNDNSFIVWNPLEFARDLLPKYFKHSNFSSFVRQLNTYGFRKIDPDQ---------WEFANEEFLRGQRHLLRNIH 101 9******************999*************************************999.........****************** PP XXX CS HSF_DNA-bind 99 rkk 101 r+k RWR96290.1 102 RRK 104 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MDASQGSSNG PPPFLTKTYE MVDDPSTNSV VSWSPNDNSF IVWNPLEFAR DLLPKYFKHS 60 NFSSFVRQLN TYGFRKIDPD QWEFANEEFL RGQRHLLRNI HRRKPIHSHS QPPNQGQGAL 120 SEAEKQELED EIEKLKHEKS MLLVELQRHK QQRHGMDLQM QSLEERLHHM EQCQRKMMTF 180 LTRIVKKPGF ISNLIQQSES HSKKRRLPKP DYFYEEADPG DNRVMSFQTT SRDKTDIISV 240 QVLNLEPFEK MESSINSWEN FFRGVGHASG EEVHSGGVVW QPSAVVLTEM NSSSGDPDIN 300 LQPSSPKFHS SSPQSRDIHS SPELTESMTY AESPSLSSIQ VHADIRSKAS GIDVNSKPAA 360 TEVQSSMEHV NVASAAATGV NDMFWEQFLT ETPGSLDTQE VQSERRETDG KRSENKPADR 420 GNYWWNRKNV DHLTEQMGQL TPAERT

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MDASQGSSNG PPPFLTKTYE MVDDPSTNSV VSWSPNDNSF IVWNPLEFAR DLLPKYFKHS  60
NFSSFVRQLN TYGFRKIDPD QWEFANEEFL RGQRHLLRNI HRRKPIHSHS QPPNQGQGAL  120
SEAEKQELED EIEKLKHEKS MLLVELQRHK QQRHGMDLQM QSLEERLHHM EQCQRKMMTF  180
LTRIVKKPGF ISNLIQQSES HSKKRRLPKP DYFYEEADPG DNRVMSFQTT SRDKTDIISV  240
QVLNLEPFEK MESSINSWEN FFRGVGHASG EEVHSGGVVW QPSAVVLTEM NSSSGDPDIN  300
LQPSSPKFHS SSPQSRDIHS SPELTESMTY AESPSLSSIQ VHADIRSKAS GIDVNSKPAA  360
TEVQSSMEHV NVASAAATGV NDMFWEQFLT ETPGSLDTQE VQSERRETDG KRSENKPADR  420
GNYWWNRKNV DHLTEQMGQL TPAERT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45710.1	1e-99	HSF family protein