PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR96255.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

DBB

Protein Properties

Length: 279aa MW: 30210.9 Da PI: 4.6047

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR96255.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	18.4	4.7e-06	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ lC C ++ H H++vpl RWR96255.1 4 QCNACEVAEASVVCCADEAALCWACDEKVHAAnklaskHQRVPL 47 7****99*******************66899999999986 PP
2	zf-B_box	18.7	3.7e-06	55	87	3	35
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHk 35 ++kC+ ++e +fC +++ llC C ++ H RWR96255.1 55 MPKCDICQETGGYFFCLEDRALLCWRCDVAVHT 87 799****99****************9995 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MKIQCNACEV AEASVVCCAD EAALCWACDE KVHAANKLAS KHQRVPLSNS SSSHMPKCDI 60 CQETGGYFFC LEDRALLCWR CDVAVHTGQC LCLQPSEWGL NLLNPFIFSS KDKSNSTQKN 120 TDMPSRSLSK KGSPMSSSGD NNEARSSQAS GSGGIPIKVS FSGAMPGIIP EWPMEETLGL 180 TDFSQNYGFF EMGSSKVYQT DCSKLEDTEW SPIHHAAAAA GEVDLNECLS QVPEIPRGVS 240 EIPSPPTASG LHWPRSFQDS CFVDNSMSVP DLCSFAEQT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	9e-63	DBB family protein