PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR96252.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

DBB

Protein Properties

Length: 305aa MW: 33178.3 Da PI: 6.2749

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR96252.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	18.2	5.3e-06	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ lC C ++ H H++vpl RWR96252.1 4 QCNACEVAEASVVCCADEAALCWACDEKVHAAnklaskHQRVPL 47 7****99*******************66899999999986 PP
2	zf-B_box	24.7	4.7e-08	55	95	3	37
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 ++kC+ ++e +fC +++ llC C ++ H H RWR96252.1 55 MPKCDICQETGGYFFCLEDRALLCWRCDVAVHTAnayvssH 95 799****99*****************99545556666 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MKIQCNACEV AEASVVCCAD EAALCWACDE KVHAANKLAS KHQRVPLSNS SSSHMPKCDI 60 CQETGGYFFC LEDRALLCWR CDVAVHTANA YVSSHQRFLL TGVKVGLEPT EPVIFSSKDK 120 SNSTQKNTDM PSRSLSKKGS PMSSSGDNNE ARSSQASGSG GLPIKVSFSG AMPGIIPEWP 180 MEETLGLTHF SQNYGFFEMG SSKTDCSKLE DTEWSPIHHA AAAAGEVDLN ECLSQVPEIP 240 RGVSEIPSPP TASGLHWPRS FQDSCFVDNS MSVPDLCSLP SKHRNQSLSF KRRRHSEEVP 300 MGSWV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	7e-80	DBB family protein