PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR96122.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 649aa MW: 71533.9 Da PI: 7.0516

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR96122.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.5	1.8e-30	407	465	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+ ed +++++tYeg+Hnh+ RWR96122.1 407 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCMEDRSILITTYEGNHNHP 465 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 649 aa Download sequence
MLPLTFDSFH QGMEGKVDRN SLSLFSLTHH QTSVASHFKR VFVPTDSSIS FSPAPFYWHE 60 NCSQKRLQRP FFLSLPFFFS SSSSYSSFFM DRGAGGLAES PGFFLTKPNS FLTAAIQPKW 120 NLNQHHHHHM DTNKQFSGIG FLENEKQTVD EMDFFSLKTR VQEFDDVKPP HLYGIKKEDS 180 CDEKYLDVNT GLNLVIGNTG SDQSTVDDGI SPNEKEEKSV LLVLKADLGR MNEENQRLKG 240 LLRQLNHNYN SLQMQIGTLM QQHNYKKEGH SQSQKNQIVD EKMEENKQGG VGGEFMVPRQ 300 FMDFGLAATA ETDEPSHYSS QGRSRDRSES PPNNVEVVSR EFEPLNNRNK GEEKNESSSG 360 HAPQDWIPNK VAKVATSKDN IDQSATEATM RKARVSVRSR SEAPMITDGC QWRKYGQKMA 420 KGNPCPRAYY RCTMAAGCPV RKQVQRCMED RSILITTYEG NHNHPLPPAA MAMASTTSAA 480 ASMLLSGSMS SADGLMNPNF LARTMLPCPS SMATLSASAP FPTVTLDLTH TPNPLQLQGQ 540 PVQFPVPLHS SPHIFNQAPY NQTKFSGLHI PSNIDAAGFA SQHPQPQPQP QPPSLSDSVG 600 AATAAITNDP NFTAALAAAI ASIIGGAQTS SSTNINSNAN HNNNDFPGT

Sequence ? help Back to Top

Protein Sequence Length: 649 aa Download sequence

MLPLTFDSFH QGMEGKVDRN SLSLFSLTHH QTSVASHFKR VFVPTDSSIS FSPAPFYWHE  60
NCSQKRLQRP FFLSLPFFFS SSSSYSSFFM DRGAGGLAES PGFFLTKPNS FLTAAIQPKW  120
NLNQHHHHHM DTNKQFSGIG FLENEKQTVD EMDFFSLKTR VQEFDDVKPP HLYGIKKEDS  180
CDEKYLDVNT GLNLVIGNTG SDQSTVDDGI SPNEKEEKSV LLVLKADLGR MNEENQRLKG  240
LLRQLNHNYN SLQMQIGTLM QQHNYKKEGH SQSQKNQIVD EKMEENKQGG VGGEFMVPRQ  300
FMDFGLAATA ETDEPSHYSS QGRSRDRSES PPNNVEVVSR EFEPLNNRNK GEEKNESSSG  360
HAPQDWIPNK VAKVATSKDN IDQSATEATM RKARVSVRSR SEAPMITDGC QWRKYGQKMA  420
KGNPCPRAYY RCTMAAGCPV RKQVQRCMED RSILITTYEG NHNHPLPPAA MAMASTTSAA  480
ASMLLSGSMS SADGLMNPNF LARTMLPCPS SMATLSASAP FPTVTLDLTH TPNPLQLQGQ  540
PVQFPVPLHS SPHIFNQAPY NQTKFSGLHI PSNIDAAGFA SQHPQPQPQP QPPSLSDSVG  600
AATAAITNDP NFTAALAAAI ASIIGGAQTS SSTNINSNAN HNNNDFPGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G04450.1	1e-116	WRKY family protein