PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR95992.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MYB | ||||||||
Protein Properties | Length: 284aa MW: 32501.9 Da PI: 5.9879 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.6 | 3.8e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l++ + G +W+++++ g+ R++k+c++rw +yl RWR95992.1 14 KGPWTAEEDRKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 51.5 | 2.4e-16 | 71 | 111 | 5 | 47 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 + E++ +d+++qlG++ W++Ia+ ++ gRt++++k++w++y RWR95992.1 71 SDSEEKMVIDLHAQLGNR-WSKIAAQLP-GRTDNEIKNHWNTY 111 788***************.*********.************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 284 aa Download sequence |
MGRQPCCEKV GLKKGPWTAE EDRKLINFIL TNGQCCWRAV PKLAGLLRCG KSCRLRWTNY 60 LRPDLKRGLL SDSEEKMVID LHAQLGNRWS KIAAQLPGRT DNEIKNHWNT YIKKKLKKMG 120 IDPLTHKPIS PPTQHQQNPI SSTIVSVAGV DEKKSSEIFI QTAISETREE EKFYTNDSDT 180 AKSDVFCTDE VPLIHPQEIL VPCDSTTTMS TSSSSVSDSF VRPEEFNFSS MEWPESMYLW 240 EMDELNGWDL MYGDGERKLV SDPISSFHQK ATAFDQDPWK FELF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16600.1 | 1e-92 | MYB family protein |