PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR95916.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

Nin-like

Protein Properties

Length: 510aa MW: 54442.9 Da PI: 6.1075

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR95916.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	76.1	4.1e-24	414	463	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +++l+dl +yF+lpi++A+k Lg+c TvLK+iCR++G+kRWP+Rkiks+ RWR95916.1 414 VKLKLNDLINYFHLPIQAASKRLGLCSTVLKKICRRNGLKRWPYRKIKSI 463 5799********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 510 aa Download sequence
MLLSPTVPAV LPPAATSSHG GGGGGRRAIY VAADLRFIRD LGLVAEISLF TRPSKRRLRS 60 VSGTSSAHLV LGIAGFASVA VPGPSTWSPC TATHALRRNM DPGSSHPNQL DSPSSSNVLR 120 FWEDPIPDFD FPYTQNDPTS SAGHLHPPPF PSAGSSHGTC EPFDHLTDNC KLLGLDDKLE 180 IEQGDNCYQS DFNNGLVIGD GNPGDGNAST SNVVYDINNP SWAPDGQLNC DGCQVLREVI 240 HSNGIDTTKL QIHGTVGFLY HGIIEVVLCG ASNEVPVSVQ HQLIDFSSHS FEQVKQYLIE 300 YGQMRTREGF SVIQDSLSAF YDCLCVGMSS GDAISTGMLG PDANGNDATG TGTWGLDADG 360 IGTSGGDDAN LNPSAPVQSV EQSGLGGQLM PTNEESSLAR LPKSNMAAQR QRTVKLKLND 420 LINYFHLPIQ AASKRLGLCS TVLKKICRRN GLKRWPYRKI KSIDKSIKSL QQSLASTSGQ 480 ENASVQAEIE KLQHIRGDIC AGILSECNAT

Sequence ? help Back to Top

Protein Sequence Length: 510 aa Download sequence

MLLSPTVPAV LPPAATSSHG GGGGGRRAIY VAADLRFIRD LGLVAEISLF TRPSKRRLRS  60
VSGTSSAHLV LGIAGFASVA VPGPSTWSPC TATHALRRNM DPGSSHPNQL DSPSSSNVLR  120
FWEDPIPDFD FPYTQNDPTS SAGHLHPPPF PSAGSSHGTC EPFDHLTDNC KLLGLDDKLE  180
IEQGDNCYQS DFNNGLVIGD GNPGDGNAST SNVVYDINNP SWAPDGQLNC DGCQVLREVI  240
HSNGIDTTKL QIHGTVGFLY HGIIEVVLCG ASNEVPVSVQ HQLIDFSSHS FEQVKQYLIE  300
YGQMRTREGF SVIQDSLSAF YDCLCVGMSS GDAISTGMLG PDANGNDATG TGTWGLDADG  360
IGTSGGDDAN LNPSAPVQSV EQSGLGGQLM PTNEESSLAR LPKSNMAAQR QRTVKLKLND  420
LINYFHLPIQ AASKRLGLCS TVLKKICRRN GLKRWPYRKI KSIDKSIKSL QQSLASTSGQ  480
ENASVQAEIE KLQHIRGDIC AGILSECNAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	9e-11	Nin-like family protein