PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR95902.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

AP2

Protein Properties

Length: 664aa MW: 72809.9 Da PI: 6.8465

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR95902.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	48.7	1.9e-15	314	373	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g RWR95902.1 314 SQYRGVTRHRWTGRYEAHLWDnSCRkEGqtRKgRQVYLGGYDKEEKAARAYDLAALKYWG 373 78*****************655454478446***********************98 PP
2	AP2	47.3	5.3e-15	416	467	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g RWR95902.1 416 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 467 78**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 664 aa Download sequence
MGHPCGWTSH RRSAYYVVMC GPPDDPSSAN PHVELHAPEL RSLEGGGRSE GREDDGCCYE 60 QRFGGGGEDG EFSHLSAMPL RSDGSLCSLE AFKKPDGEWR YDQSITNPNK EGPKLEDFLG 120 GYSNTTQELN NNNESSNQVS QSISSFNQLY YQNPQTFNQR DHDPNPRINV NIPPTLSNST 180 PDIEQEENLT DPSSSNLIQA FHHPHHYNNN QTLIPTTHFQ NPNPSNGLYH VALDGAATSI 240 SGFKSWLRQQ NPFPPDKSPA DSAGKCSQPL SLSMNGGSPS SSAAADERKR PAGRSLAKEP 300 IPRKSIDTFG QRTSQYRGVT RHRWTGRYEA HLWDNSCRKE GQTRKGRQVY LGGYDKEEKA 360 ARAYDLAALK YWGPTTHINF PLSTYEKELE EMKNMTRQEF VAHLRRKSSG FSRGASVYRG 420 VTRHHQHGRW QARIGRVAGN KDLYLGTFST QEEAAEAYDI AAIKFRGVSA VTNFDISKYD 480 VKRICSSTTL IAGDLAKRSP RDSPAVVSTE DGQDHSSLPP QFPLAITNGS TDELASMACH 540 NINQQHYEPN SSNRLGSDGV QLISTSSTLN SSGPGSPKNS GAYQTDGGVE KATMMLYDCS 600 GAGGGGFGES PKSIYFPSIA PKYEGVKGNG SNDNASGEGG NWMPVARSEP AAVHQLPMFA 660 LWNE

Sequence ? help Back to Top

Protein Sequence Length: 664 aa Download sequence

MGHPCGWTSH RRSAYYVVMC GPPDDPSSAN PHVELHAPEL RSLEGGGRSE GREDDGCCYE  60
QRFGGGGEDG EFSHLSAMPL RSDGSLCSLE AFKKPDGEWR YDQSITNPNK EGPKLEDFLG  120
GYSNTTQELN NNNESSNQVS QSISSFNQLY YQNPQTFNQR DHDPNPRINV NIPPTLSNST  180
PDIEQEENLT DPSSSNLIQA FHHPHHYNNN QTLIPTTHFQ NPNPSNGLYH VALDGAATSI  240
SGFKSWLRQQ NPFPPDKSPA DSAGKCSQPL SLSMNGGSPS SSAAADERKR PAGRSLAKEP  300
IPRKSIDTFG QRTSQYRGVT RHRWTGRYEA HLWDNSCRKE GQTRKGRQVY LGGYDKEEKA  360
ARAYDLAALK YWGPTTHINF PLSTYEKELE EMKNMTRQEF VAHLRRKSSG FSRGASVYRG  420
VTRHHQHGRW QARIGRVAGN KDLYLGTFST QEEAAEAYDI AAIKFRGVSA VTNFDISKYD  480
VKRICSSTTL IAGDLAKRSP RDSPAVVSTE DGQDHSSLPP QFPLAITNGS TDELASMACH  540
NINQQHYEPN SSNRLGSDGV QLISTSSTLN SSGPGSPKNS GAYQTDGGVE KATMMLYDCS  600
GAGGGGFGES PKSIYFPSIA PKYEGVKGNG SNDNASGEGG NWMPVARSEP AAVHQLPMFA  660
LWNE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72570.1	1e-130	AP2 family protein