PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR95901.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

GRF

Protein Properties

Length: 359aa MW: 40346.9 Da PI: 8.4986

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR95901.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	79	4.4e-25	81	124	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++ +++k+CE+H+hrgr+rsrk++e RWR95901.1 81 DPEPGRCRRTDGKKWRCSKEAFPDSKYCEKHMHRGRNRSRKPVE 124 79***************************************997 PP
2	QLQ	57.1	5.3e-20	11	44	2	35
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 +FTa+Q+q+L++Q+l++Ky++a+ P+P++Ll + RWR95901.1 11 PFTASQWQELEHQALIFKYMVAGIPIPSDLLYPF 44 8*****************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MMMNARQRPL PFTASQWQEL EHQALIFKYM VAGIPIPSDL LYPFRRGMDA LSMSTPTPPR 60 HFPTQPIGWG CFQMGCGRKP DPEPGRCRRT DGKKWRCSKE AFPDSKYCEK HMHRGRNRSR 120 KPVEMTTATA ANTSGDTSFA NPHPNSAKPT TTPSLFSPSA AAENHHHSFL NPNPLSFRPP 180 GIGFSTQNNS PHFTLGTGSI SSSADRDYRY LHGLKEGVDE HPFFSEASGS LRNLTSSAFD 240 SSWRSNTSSL AQRKHGNCSS FSSSYSQLQM HNNHTDMAKQ QLEKHCFSLD HVNMKREDEP 300 QQPLRQFFDE WPLKNRDSWL DLEEDPSNPT SFPATQLSIS IPMASSEFPS SNPRPGNGD

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MMMNARQRPL PFTASQWQEL EHQALIFKYM VAGIPIPSDL LYPFRRGMDA LSMSTPTPPR  60
HFPTQPIGWG CFQMGCGRKP DPEPGRCRRT DGKKWRCSKE AFPDSKYCEK HMHRGRNRSR  120
KPVEMTTATA ANTSGDTSFA NPHPNSAKPT TTPSLFSPSA AAENHHHSFL NPNPLSFRPP  180
GIGFSTQNNS PHFTLGTGSI SSSADRDYRY LHGLKEGVDE HPFFSEASGS LRNLTSSAFD  240
SSWRSNTSSL AQRKHGNCSS FSSSYSQLQM HNNHTDMAKQ QLEKHCFSLD HVNMKREDEP  300
QQPLRQFFDE WPLKNRDSWL DLEEDPSNPT SFPATQLSIS IPMASSEFPS SNPRPGNGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	4e-55	GRF family protein